Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272217g00003 ATGCCTCCGGAGTATGTAGTGCACGGACAATACTCAATGAAGTCAGATGTTTTTAGCTATGGTGCGATTGTATTAGAGTTGGTAAGTGGGAAGAAAAATAGGCAGTTCTCAGAACAAGAACACAGCCTTAATCTTCTTGGGCATGCTTGGAGATTATGGTCTAATGAGAGGCCATTGGAACTATTAGATGAAGTGTTAAAGGAAGGATGCACCCGTTCCGAAGTCATACGATGCATACAAGTGGGTTTGTTATGTGTGCAGCAAAGACCAGAAGATAGGCCAGACATGTCATCAGTGGTTCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAAGTTCCTGGTTTTTATACAGACACAAGTGTTGCACTTGAAACAGATTCTTTGTTGAAGAATTACACATCATTCTCAATCAATGAAATTTCAATCACAATGTCAGATGCAAGATAG 453 0.4018 MPPEYVVHGQYSMKSDVFSYGAIVLELVSGKKNRQFSEQEHSLNLLGHAWRLWSNERPLELLDEVLKEGCTRSEVIRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPKPKVPGFYTDTSVALETDSLLKNYTSFSINEISITMSDAR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272217g00003 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 150 - -
Stsc272217g00003 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Stsc272217g00003 150 SUPERFAMILY Protein kinase-like (PK-like) 1 124 IPR011009 -
Stsc272217g00003 150 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272217g00003 150 Pfam Domain of unknown function (DUF3403) 109 150 IPR021820 GO:0004674
Stsc272217g00003 150 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272217g00003 Stsc-Chr272217 9445 9979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272217g00003 1 118 Receptor kinase-like Gene Family AT4G23140 52.941 1.67e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc272217g00003 PK_Tyr_Ser-Thr 1.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272217g00003 - - adu:107464241 282.337