Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272210g00005 ATGCTTACTGTCATCTTTGAAGGTTTGGAGGATATTCAGAAGGAAATTTTCCTTGACATTGCATGTTTCTTTGTTGGTGAGAAGTTGGAATATGTGAGCAACATGTTGCTGCACGGCCGCGGCTTCAACCCCGAGTATGGAATTGGTGTTTTGATTCAGAAATCTCTCTTAATGGACAAATATGGTCATGCAGCAATGCATGACTTGGTAACAGAAATGGGGAGAGAAATTGTGAGGAAAGAATCAGAGGTAGAACCTGGCAATCGCAGTAGGCTATGGTTCTATGAAGACATTATTCATGTTTTAGAAGAAGACATGGGATCTGAGAAAACAGAAATCATGATCATTGATTTGCCTGAAGATGAAGAAGTGTTTTGGACAGGAGAAGAATTTAAGAAGATGAAAAACCTCAAAATACTCAAAGTCACAAATGCAAGGTTCTCTACAACTCCCAAATATCTCCCAAATTCCTTAAGAGTGCTCGATTGGGAACGATATCCATCACCATGCTTACCACCAGATTTTCGTCCACGGAAACTCAGCATGCTCAACTTGCCTAACAGTTCCCTCAAGTTGGATAATCCCCTGAAGAACTTTAAGAGTTTGAGTCACATGAATTTTGAAGGCTGTGAATCATTGGTACAACTACCTGACCTATCTGGAGTCCCAAATTTGACAGAACTCTACCTTGATGATTGCATAAATTTGAATAAAATCCATGATTCAATTGGATTTCTTCATAAACTCAGGAAGTTTAGTGCTAAAGGATGCACTAACCTCAGCTTATTTCCTTGTAGTATCGACTTGACATCTCTTGAAACTTTCTCATTGTGGGGGTGCTCAAGTCTAAGAAACTTCCCAGAAATTTTAGGAAAGATGGAATATCTAGAAGATGTTGATTTGGGATCAACTGCGATTGAAGCGCTTCCACATTCGATACAAAATCTTGTTGGCCTTAGACGGCTCGACTTGATAAGTTGTAACAGTCTTAGTCAATTGCCAAGTAGCATTTTCTTGTTGCCGAAACTCGAGTCACTGGAAGCTGAATCATGTAAAGGGTGTCAAATATTAAGCAATTATGAAGGACAAGAAAATATGGGCATCATAGTCTCTTCAAAAGTGAAGGATCTTCACCTTAGAGCTTGCAATGTATCTGATGAATCTCTTCCTATTTATTTCACTTGCTTTCCCAACATAGAAATGTTACATTTGGGCTCAAATAACTTCACAACCCTCCCTTCCTGCATCAAAGACTGTCGCTTTCTGACGAGCGTATACTTGGATGACTGCAAGCTACTTCAACACATCACATCACTTCCACCAAACATCAAAACTTTATCAGCAAGGAACTGCATATCCTTGACTTCACACTCTACAAGCATGTTGTTGAGTCAGGGAATACATGAAGTTGGGGGGACACACTTTATGTTTCCGGGAACAAAAATTCCAGATTGGTTTGACCAACACAAGGAGGGAGCATCAGTATCTTTCTGGTTTCGAAAGNNNNNNNNNNCGCGCTTTGTTTTGTTTTCGGAGGCTTGGACATGGAGCCTAGGAAATTTGAGGTCAAGTTCTATGTATTCATCAATGGCAAACCACCATTCTATTCCAATGAGGGTGGCAATACCTTCAGAATGCTGA 1641 0.3991 MLTVIFEGLEDIQKEIFLDIACFFVGEKLEYVSNMLLHGRGFNPEYGIGVLIQKSLLMDKYGHAAMHDLVTEMGREIVRKESEVEPGNRSRLWFYEDIIHVLEEDMGSEKTEIMIIDLPEDEEVFWTGEEFKKMKNLKILKVTNARFSTTPKYLPNSLRVLDWERYPSPCLPPDFRPRKLSMLNLPNSSLKLDNPLKNFKSLSHMNFEGCESLVQLPDLSGVPNLTELYLDDCINLNKIHDSIGFLHKLRKFSAKGCTNLSLFPCSIDLTSLETFSLWGCSSLRNFPEILGKMEYLEDVDLGSTAIEALPHSIQNLVGLRRLDLISCNSLSQLPSSIFLLPKLESLEAESCKGCQILSNYEGQENMGIIVSSKVKDLHLRACNVSDESLPIYFTCFPNIEMLHLGSNNFTTLPSCIKDCRFLTSVYLDDCKLLQHITSLPPNIKTLSARNCISLTSHSTSMLLSQGIHEVGGTHFMFPGTKIPDWFDQHKEGASVSFWFRKXXXXRFVLFSEAWTWSLGNLRSSSMYSSMANHHSIPMRVAIPSEC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272210g00005 546 Gene3D Ribonuclease Inhibitor 115 283 IPR032675 -
Stsc272210g00005 546 SUPERFAMILY "Winged helix" DNA-binding domain 2 103 IPR036390 -
Stsc272210g00005 546 Gene3D Ribonuclease Inhibitor 284 465 IPR032675 -
Stsc272210g00005 546 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 341 IPR044974 GO:0006952
Stsc272210g00005 546 SUPERFAMILY L domain-like 111 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272210g00005 Stsc-Chr272210 16424 19075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272210g00005 5 351 WRKY Transcription Factor Family AT4G12020 37.940 1.24e-52 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272210g00005 - - ahf:112730546 920.613