Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272197g00003 ATGGTTGAAAGTGCTAAAGAAAGCATCAATGATGGAGCCAGCAAATCAGAAATCTATGAGAATCTGCAAGCTTTGTTTATAGAAATGGATAGCAGCTCTCAAGATAAGCATTCAGTGTCAAAAGAACTAGCTGATTTAAAAGAGATTGTCCTAAACAAGGAGAGCACATTATTTGACCCTGAGAAACACATTGATGCATATCTACCTGTGAGAGTTAATGAGCAGAGACTCAGCAATCTCTTACGATCACTCCTTGTTGGAGCATCAATCTTTGCTATGCCGGCCATAAAAAAGATACCAACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGCCTTCCAGGGAATCAATTCTGGGAAAGAATACTTCTACTCTTTGTCACACCTAGTAGGTGGTACAAGTAA 414 0.3937 MVESAKESINDGASKSEIYENLQALFIEMDSSSQDKHSVSKELADLKEIVLNKESTLFDPEKHIDAYLPVRVNEQRLSNLLRSLLVGASIFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272197g00003 137 PANTHER ANION EXCHANGE PROTEIN 41 136 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc272197g00003 137 Pfam HCO3- transporter family 70 131 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272197g00003 Stsc-Chr272197 28365 28846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272197g00003 1 137 Antiporters AT1G15460 62.585 9.25e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272197g00003 K24194 - gmx:100811184 216.468