Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272197g00002 ATGAGTTTTAAGGTTCCTAATAAGGGGAACCCAACATTGGATAAGTACCAGTTTATTTGGTTGTATGTTAATGGATTACTGGGTATTATATTCACCTTTGGCCTTCTTTATAGTGCCTTAAAAAGCATAAGAGCAAGGTCATGGTTATATGGAACAGATTATGGGGTGCCTCTCATGGTGCTGTTCTGGACAGGTTTATCATTCACAGTACCAAGTAAAGTGCCTTCTGGAGTTCCAAGAAGGCTTATTTCTCCTCTTGCTTGGGATTCCACATCTTTGCACCATTGGACTGTGATCAAAGACATGGGAAAGGTTTCAGCAACATATATATTTGCTGCTTTTGTTCCTGCTATAATGATAGCAGGGCTTTATTTCTTTGACCACAGTGTTGCTTCTCAGTTAGCACAGCAGAAGGAATTCAATCTCAAGAAGCCTTCTGCATATCACTATGACATGTTACTGCTTGGATTCATGGCATGTTTCTGTCTTACTACTATAATTTAA 504 0.3909 MSFKVPNKGNPTLDKYQFIWLYVNGLLGIIFTFGLLYSALKSIRARSWLYGTDYGVPLMVLFWTGLSFTVPSKVPSGVPRRLISPLAWDSTSLHHWTVIKDMGKVSATYIFAAFVPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDMLLLGFMACFCLTTII 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272197g00002 167 PANTHER ANION EXCHANGE PROTEIN 3 162 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc272197g00002 167 Pfam HCO3- transporter family 52 162 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272197g00002 Stsc-Chr272197 22120 22814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272197g00002 2 162 Antiporters AT1G15460 73.964 5.79e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272197g00002 K24194 - gmx:100811184 264.233