Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272196g00003 ATGAAAGGAACAAGTATGGCCAATCCTGTTAACTTTCTCCTGCTTCTTTCTCTAATAGCCTTTGCTTCCTTTTGCCAATGTGACAAGAAAGTAGGAGGTTACCTCTACCCGCAATTTTATGACAAGTCTTGCCCGAGAGCTCAAGAGATAGTCAAGTCCATTGTGGCCAAAGCAGTTGCAAAGGAAACACGCATGGCTGCTTCCCTGCTGAGATTACATTTCCATGACTGCTTTGTCAAGGGCTGTGATGGATCAGTGTTGCTAGATAGCAGTGGAACCATTATCAGCGAGAAGAGGTCAAATCCCAACCGTAATTCGGCTCGAGGATTTGAAGTTGTGGATGAAATCAAATCAGCACTAGAGAAGGAATGCCCTGAGACTGTGTCATGTGCTGACATTTTAGCTATAGCTGCTAGAGATTCAACTGTTCTTACTGGTGGACCAAGCTGGGAAGTGCCTCTAGGCAGAAGGGATTCTCTTGATGCAAGTATAAGTGGCTCTAACTACAACATTCCTGCCCCCAATAACACATTCCAAACCATCCTAACTAAATTCAAGCTCAAGGGCCTCGATATTGTTGATCTAGTTGCTCTATCTGGTAGCCATACTATTGGAGATTCAAGGTGTACCAGCTTCAGGCAAAGACTCTACAACCAAACTGGCAATGGAAAAGCAGATTTCACTCTTGACCAATTCTATGCTTCTCAGTTGCGCACTCACTGCCCAAGATCCGGCGGAGACCAGAACCTGTTTGTGCTAGACTTTGTCAGCCCGGCAAAATTTGACAACAGCTACTACAAGAACTTACTGATTAAGAAGGGTTTGTTGAGCTCTGATGAAATTCTCTTGACACAGAATTCAGTGTCTGCAGGTTTAGTGAAGAAGTATGCTGAAAGTAATGAACTTTTCTTTGAACAATTTGCCAAGTCCATGGTTAAGATGGGGAACATCACTCCCTTAACAGGCTCAAGGGGTGAGATCAGAAAGATTTGCCGAAGGGTTAATGCTTAA 1011 0.4392 MKGTSMANPVNFLLLLSLIAFASFCQCDKKVGGYLYPQFYDKSCPRAQEIVKSIVAKAVAKETRMAASLLRLHFHDCFVKGCDGSVLLDSSGTIISEKRSNPNRNSARGFEVVDEIKSALEKECPETVSCADILAIAARDSTVLTGGPSWEVPLGRRDSLDASISGSNYNIPAPNNTFQTILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFTLDQFYASQLRTHCPRSGGDQNLFVLDFVSPAKFDNSYYKNLLIKKGLLSSDEILLTQNSVSAGLVKKYAESNELFFEQFAKSMVKMGNITPLTGSRGEIRKICRRVNA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272196g00003 336 CDD secretory_peroxidase 35 334 IPR033905 GO:0004601|GO:0042744
Stsc272196g00003 336 Gene3D - 39 335 - -
Stsc272196g00003 336 PANTHER PEROXIDASE 72-RELATED 34 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Stsc272196g00003 336 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 Gene3D Peroxidase, domain 2 172 315 - -
Stsc272196g00003 336 FunFam Peroxidase 172 314 - -
Stsc272196g00003 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc272196g00003 336 Pfam Peroxidase 51 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 FunFam Peroxidase 38 179 - -
Stsc272196g00003 336 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272196g00003 336 SUPERFAMILY Heme-dependent peroxidases 35 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272196g00003 Stsc-Chr272196 20822 22594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272196g00003 6 335 Peroxidase AT5G66390 76.276 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272196g00003 K00430 - gmx:100788562 581.252