Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272193g00006 ATGGATTCATCATCATCAGATGTTGCAGTGAAACAAGGAGTAATCTCAAGAAGAAGAACAAGTGATGAAAAAGCAATTAAGGTTCCATCATCATCAACATCACATCAATGGCTAAGATTGAAGGATCCTCGGATAGTGCGTGTATCAAGGGCGTTTGGAGGAAAAGACAGGCACAGCAAGGTTTGCACAATAAGAGGGCTAAGAGACAGAAGGGTAAGGCTTTCAGTTCCCACTGCAATTCATCTCTATGATCTTCAAGACAGGTTAGGGCTCAATCAACCAAGCAAGGTTGTTGATTGGTTACTCAATGCTGCTAAGCATGAAATTGATGACCTTCCCCCTCTTCCTATTCCTCCTTCATCTTTCACCCTTTCTTGTTATCCCTCTCTTCCTACTAATAATAAATCTAAACAAATTCTTACTAGTACTCAAAAAGATCATAGAGGTGATGAAGATGAAGAGGAGGAAAATAGTATTAGTAATAATAACAGTGCACAACATGTTTTTCCTAATAGTTTTTTATTACCAAGAACAATAAATCATCACCATCCTTCATTCTTGGGATTGTTGAACACTATGCCATCATCAATTGGTAATAATAATAATTGTTACCAATGGGAGCATTCTTCTTCTTCAGCTTCTCATCATCATCATCATGATGTTGCTCATCAATTATTGGGGAATAATAATACTAATAATAATAGTAATAATCTTGGATTTGTGAACCAAACAGATTTGCATCATTATCATGGTGGTGGTGGTGGTGGGGTTAATGTTGTAAATTTACCATTTCCAAATTTAGGAGCTTCTCAAATATTGTTTTGTTCTCCTTCTCCTCTTCAACGAGGGGCGGCGGCAGTGACAACGACGGCGACAACACAGTCATATTTTCCTGCTTCTTCTTTTTCTTCACATGATAATGATAATGTTGGTGCTGCAATGGAAACAATGGATTCAAGACAAATCAACCACCATCACCATCAGATGATGATGAATCCGAAACTTATTCTCCATTCATCATCACCTAATAGAAGCGAAAGCCAATCACATGCTGATGATAGTGCAAATTAA 1071 0.3763 MDSSSSDVAVKQGVISRRRTSDEKAIKVPSSSTSHQWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSSFTLSCYPSLPTNNKSKQILTSTQKDHRGDEDEEEENSISNNNSAQHVFPNSFLLPRTINHHHPSFLGLLNTMPSSIGNNNNCYQWEHSSSSASHHHHHDVAHQLLGNNNTNNNSNNLGFVNQTDLHHYHGGGGGGVNVVNLPFPNLGASQILFCSPSPLQRGAAAVTTTATTQSYFPASSFSSHDNDNVGAAMETMDSRQINHHHHQMMMNPKLILHSSSPNRSESQSHADDSAN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272193g00006 356 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 306 IPR005333 GO:0003700
Stsc272193g00006 356 MobiDBLite consensus disorder prediction 337 356 - -
Stsc272193g00006 356 Pfam TCP family transcription factor 54 158 IPR017887 -
Stsc272193g00006 356 MobiDBLite consensus disorder prediction 133 166 - -
Stsc272193g00006 356 MobiDBLite consensus disorder prediction 1 28 - -
Stsc272193g00006 356 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272193g00006 Stsc-Chr272193 33618 34688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272193g00006 7 124 TCP Transcription Factor Family AT3G02150 66.942 1.80e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc272193g00006 TCP 7.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272193g00006 - - adu:107471262 414.846