Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272190g00003 ATGATAATCTTCAACCCAATTTTCATTCTCTTTTTTACAATCCTAATACTCTTCCTACTTAACTACACAACAAAATCCAAGAAGCTCAACCTTCCTCCAGGTCCCCCTGCTTGGCCTATTGTTGGTAATCTCTTCCAAGTTGCACGTTCTGGAAAGCCCTTTTTCGCTTTCGTGAACGATGTGAGGCAAAAATATGGCCCAATTTTCACCCTCAAGATGGGTACAAGAACCATGATCTTCCTCAGCGACCCCAAACTAATCCACGAGGCTTTGATCGAAAACGGTGCGCTCTACGCTAGCAGGCCACCTGAGACTCCAACAAGGAGCGTCTTCAGCGTCAACAAGTTCACCGTTAACGCCGCCACGTACGGCCCCGTATGGCGGTCCCTCAGGAAGAACATGGTTCACAACATGCTCAGCTCCACCAGGCTGAAGGAGTTTCGTTCCGTTAGAGAGAAAGCGATGGACAAACTCATCGACAGGCTCCGAGCCGAAGCAGAGGCTAACAACGGCGTCGTTTGGGTTCTGAAGGATGCAAGATTCGCCGTCTTCTGCATACTTCTCACCATGTGTTTCGGCCTCGAAATGGACGAAGAAACTGTTGAGAAAATGGACCAGATGATGAAGCTTGTCCTCATTACAGTGGACGCGAAGATCTACGATTATCTCCCGATCTTGAAGCCTTTTTACTCGAAGCAGAGGAAGAGAGCCTTGGAGATTCGCAAGGAGCAGATTGAGTTCATGGTTCCCTTTATTGAGCAGAGGAGGAGAGCGATTCAAACCCCTGGCTCGGATCTATCCGCTACTTCGTTTTCCTACCTTGACACGCTCTTCGACCTCAAGATCGAAGGGCGAACATCTTCGCCTTCAATGGATGAATTGGTTACCCTCTGCTCCGAGTTTCTTAACGGCGGTACCGACACCACGGCTACCGCCGTCGAGTGGGGGATTGCGGAGTTAATCGAGAACCCGCACGTGCAAAAGAAGCTGTTTGAGGAGATCAAAGAAACGGTTGGAGGAGAGAGGAAAGTGAATGAAAAGGACGTGGAGAAGATGCCGTACTTGCAAGCAGTGATGAAGGAGCTGTTAAGGAAGCATCCTCCAACATACTTTACACTCACTCATGCAGTAACTGAACCAACTACCATAGCAGGGTTTGACATACCAACTGATGTGAATGTGGAAATCTTTATTAAGCCGTTTGGAAATGACCCCAAATTTTGGAGTAATCCGGAGAAATTCGATCCGGAGAGGTTCATGGAAGGAGGGATGGAGAAGGACGTTGACATTACCGGAGTGACCGGGACCATGAAGATGATGCCGTTTGGGGTGGGGAGAAGGATATGCCCTGGATTGGGTATGGCGACGGTTCATGTTCACCTGATGCTTGCCAGGATGGTGCAAGAGTTTGAGTGGAGTGCATATCCGGAAGGTAAGCCTTTGGATTTCAGTGGCAAGTTGGTGTTCACTGTGGTTATGAAAGAATCTCTCAGAGCAACCATTAAGCCAAGATCATCATTAGCATCAGCATAA 1533 0.4847 MIIFNPIFILFFTILILFLLNYTTKSKKLNLPPGPPAWPIVGNLFQVARSGKPFFAFVNDVRQKYGPIFTLKMGTRTMIFLSDPKLIHEALIENGALYASRPPETPTRSVFSVNKFTVNAATYGPVWRSLRKNMVHNMLSSTRLKEFRSVREKAMDKLIDRLRAEAEANNGVVWVLKDARFAVFCILLTMCFGLEMDEETVEKMDQMMKLVLITVDAKIYDYLPILKPFYSKQRKRALEIRKEQIEFMVPFIEQRRRAIQTPGSDLSATSFSYLDTLFDLKIEGRTSSPSMDELVTLCSEFLNGGTDTTATAVEWGIAELIENPHVQKKLFEEIKETVGGERKVNEKDVEKMPYLQAVMKELLRKHPPTYFTLTHAVTEPTTIAGFDIPTDVNVEIFIKPFGNDPKFWSNPEKFDPERFMEGGMEKDVDITGVTGTMKMMPFGVGRRICPGLGMATVHVHLMLARMVQEFEWSAYPEGKPLDFSGKLVFTVVMKESLRATIKPRSSLASA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272190g00003 510 FunFam Cytochrome P450 family protein 25 506 - -
Stsc272190g00003 510 CDD CYP77_89 64 498 - -
Stsc272190g00003 510 SUPERFAMILY Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc272190g00003 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 491 - -
Stsc272190g00003 510 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272190g00003 510 Pfam Cytochrome P450 32 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272190g00003 Stsc-Chr272190 20162 21694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272190g00003 23 504 Cytochrome P450 AT3G10570 67.012 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272190g00003 K21995 - qsa:O6P43_004935 776.163