Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272189g00010 ATGGGACCATGGTTCACCAAATTGAACTATATGATCACTAGTGACCCCTTGAATGTTCATCACATAATGAGCAAAAACTTTGACAATTATGTCAAGGGTCCCGAGTTTCGCGAGATCTTCCAACCTTTCGGAGATGGTCTTGTCGCTGCAGATTCTGAGTCACGGAAATACAGAAGGGCCTTGCTCCAATCCTTGTTCCGAAGAAAGAGTTATGAGATTATGTCGGAGAAAACCATTCAGAAGAAGGTCCAGAATAGCTTACTTCCGATATTAGATCATGCATGTTTGCATGGAAAGGTTTTGGATCTTCAAGATGTGTTTAGTCGATTGATGTTTGACGAGACGTGCCTCATGGTTTTAGGTTATGATCCTAATAGTCTCTCAATTGACCTTCCATTGGTTGAAGTTGCGAAGGCTTATGATGAAGTTGAGGAGTCCATATTCTACAGGAACATAATGCCAACAAGTGTTTGGAAGTTTCAAGAATGGCTTCAAATTGGCGAGGAGAAGAAGATGACGAAAGCAAGCAAAATTTTTGACCAATTTCTATATTCGTGCATTGCAAGAAAGCGCCAAGAGTTAATAAGCAAATGCAACAAAAGAAGTAATAATGATGTGCTCAATTCTATCATGATGGTGAGCCAAGAGAACAAAATGGTGCATGATGATAAATATCTAAGAGACACTGCATTTAATCTTTTTGCTGCAGGAAGAGGTACCATAACTTCGGGTCTTACATGGTTTTTTTGGCTTGTTGCGACACATCCATTAGTAGAGTCCAAGATTCTTGAAGAAATCGAAGAAAATTTTGGAGCCATTGACGGGGAGAAACGCAATATTTTAGGGATTGAGGATATGCAAAAACTAGTTTACCTACATGGTGCTCTATGTGAAAGTTTGAGGTTATTTCCACCTGTTCCTATTGAGCGAAAGCAATCATTGAAATATGACACACTTCCTAGTGGTCATCGTGTTAATCCAAATACAACAACTTTGTTGTTTATTTATGCAATGGGAAGGTCCTAG 1026 0.3928 MGPWFTKLNYMITSDPLNVHHIMSKNFDNYVKGPEFREIFQPFGDGLVAADSESRKYRRALLQSLFRRKSYEIMSEKTIQKKVQNSLLPILDHACLHGKVLDLQDVFSRLMFDETCLMVLGYDPNSLSIDLPLVEVAKAYDEVEESIFYRNIMPTSVWKFQEWLQIGEEKKMTKASKIFDQFLYSCIARKRQELISKCNKRSNNDVLNSIMMVSQENKMVHDDKYLRDTAFNLFAAGRGTITSGLTWFFWLVATHPLVESKILEEIEENFGAIDGEKRNILGIEDMQKLVYLHGALCESLRLFPPVPIERKQSLKYDTLPSGHRVNPNTTTLLFIYAMGRS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272189g00010 341 Gene3D Cytochrome P450 1 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00010 341 PANTHER CYTOCHROME P450 10 340 - -
Stsc272189g00010 341 Pfam Cytochrome P450 9 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00010 341 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00010 341 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00010 341 SUPERFAMILY Cytochrome P450 4 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272189g00010 Stsc-Chr272189 42909 44047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272189g00010 2 340 Cytochrome P450 AT1G47620 44.798 3.70e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272189g00010 - - aprc:113867564 442.965