Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272189g00009 ATGGGACCATGGTTCACGGAAGAGAACTATATCATCACTTGTGACCCCTTAAATATTCATCACATAATGAGCAAAAATTTTGACAACTATGTCAAGGGCTCCAGGTTTCGTGACATCTTCGAACCCTTCGGAAATGGTCTTGTTGGAGCAGATTCCGAGATATGGAAATACAAAAGGGCCTTCACGCGGTCCTTGATGCAGAAATTGAGTTTTGATACGATGTCGGAGAGGACCATTCAAAAGAAGGTCCAGAATAGCTTGCTTCCAATATTTGATCATGCATGCTTGCATGGAAAGGTTTTGGATCTCCAAGATGTGTTTAGTCGACTAATGTTTGACGAGACATCCATCATGGTTTTAGGATATGATCCTAAAAGTCTCTCAATTGAATTTCCACCGGTCAATGTTGAGAACGCTTTCGATGAAGTTCAAGAGTGCGTCTTTTATAGAAACATGGTGCCAATAAGTGTTTGGAAGTTTCAAGAATGGCTTCAAATTGGTAGCGAGAAGAAGTTGACAAAAGCGCGCAAAGTTTTTGACCAATTTCTATATTCACATATTGCAGCAAAGCGTCAAGAGTTAAAAACCAGCAAATGCAACAACATTAGTGATGATTTGCTCACTGAACAAATGATGATGACAGACGAAAATGGCAAAATGGTGCATGATGATAAGTTTTTGAGAGATGCTTCGTTCAATCTTTTTGCAGCTGGAAGAGATACCATAACTTCGGGTCTTACATGGTTTTTTTGGCTTGTTGCAACACACCCATCAGTGGAGGCCAAGATTCTTGAAGAAATCGAAGAGAATTTTGGCGACGTTAACGGGAAGAAACGCCAAGTTTTAGGGATTGAGGATGTGAAAAAGCTAGTTTATCTACATGGTGCTCTGTGTGAAAGTTTAAGGTTATTTCCACCTATCCCTGTTGAACGTCCTAGGACATGCTTGGGGAAAGATGTGTCTCTTTTTCAAATGAAAATAATAGCAGCTACTATTTTGGGCAACTATCATATACAAGTGGTGAAAAATCATCCTGTTACCCCAGCTCAATCAATTATGCTTCTTATGAAGCATGGCTTGAAGGTTAACACGACAAGAAGACAAGTTTAG 1110 0.3982 MGPWFTEENYIITCDPLNIHHIMSKNFDNYVKGSRFRDIFEPFGNGLVGADSEIWKYKRAFTRSLMQKLSFDTMSERTIQKKVQNSLLPIFDHACLHGKVLDLQDVFSRLMFDETSIMVLGYDPKSLSIEFPPVNVENAFDEVQECVFYRNMVPISVWKFQEWLQIGSEKKLTKARKVFDQFLYSHIAAKRQELKTSKCNNISDDLLTEQMMMTDENGKMVHDDKFLRDASFNLFAAGRDTITSGLTWFFWLVATHPSVEAKILEEIEENFGDVNGKKRQVLGIEDVKKLVYLHGALCESLRLFPPIPVERPRTCLGKDVSLFQMKIIAATILGNYHIQVVKNHPVTPAQSIMLLMKHGLKVNTTRRQV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272189g00009 369 Pfam Cytochrome P450 4 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 PANTHER CYTOCHROME P450 312 362 - -
Stsc272189g00009 369 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 PRINTS E-class P450 group I signature 294 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 SUPERFAMILY Cytochrome P450 4 367 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 Gene3D Cytochrome P450 1 310 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00009 369 Gene3D Cytochrome P450 311 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272189g00009 Stsc-Chr272189 35553 36866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272189g00009 2 367 Cytochrome P450 AT4G32170 37.443 8.85e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272189g00009 - - ahf:112749282 398.667