Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272189g00005 ATGGCCATGTTGTTTCCCTATGCAGCAACAATAATTGTATCGGCCTTCCTATTCCTATATGTTCATCATCGTAGAAGAAATTCTTGTAGAACCCCTCTCTTAACAGATTGGCCAATCCTTGGCATGTCACCACAATTCTTTGGCAATATGTGGCAATTCCATGATTATGTAACAAATGCTTTGAGAAAAAAAGGTGGCACCGGTGAACTCATGGGACCATGGTTCACGGAAGATAACTATATCGTCACTTGTGACCCCTTAAATGTTCATCACATAATGAGCAAAAACTTTTACAACTATGTTAAGGGCTCCAAGTTTCGCGAGATTTTCGAACCCTTTGGAAATGGTCTCATTGGTGCAGATACTGAGATGTGGAAATACAAAAGGGCCTTAACACAATCAGTGTTGCGAAAATTGAGTTTCGAGACTATGTCGGAGAAGACCATTCAAAAGAAGGTCCAGAATGGCTTGCTTCCAATACTTGATCATGCATGTTTGCATGAAAAGGTTTTGGATCTTCAAGATGTGTTTAGTCGACTAATGTTTGACGAGACATCCATCATGGTTTTAGGGTATGATCCTAAAAGTCTCTCGGTTGAATTTCCATTGGTCAGTGCTGAGAAGGCTTTCAATGAAGTTCAGGAGTGCATCTTCTATAGGAACATGGTGCCAATAACTCTTTGGAAGTTTCAAGAATGGCTTCAAATTGGTAGCGAGAAGAAGCTGACAAAAGCGCGCAAAATTTTTGACCAATTTGTGTATTCACACATTGCAGCAAAGCGTCAAGAGTTAAAAAATAGCAAATGCAACAAATTTAGTGATGACTTGCTCTCTGAGCAAATGATGTTGACTGACGAGAATGGAAAATTTGTGCATGATGATAAGTTTCTAAGAGATGCTTCATTCAATCATTTTGCAGCAGGAAGAGATACCATAACTTCGGGTCTTACATGGTTCTTTTGGCTTCTTGCAAAACACCCATCAGTGGAAGTGAAGATTCTCGAAGAAATTAAAGAAAATTTTGACGCTATTGACGGAAAGAAACACGAAGTTTTAGGGATTGAGGATGTGAAGAAGCTAGTTTACCTACATGGTGCTCTATGTGAAAGTTTGAGACTATTTCCACCTGTTCCTGTTGAACGTAAACAGTCATTGAAATCTGATACACTTCCTAGTGGTCACCGTGTTAATCCAAATACCTATATTTTGTTGTTTACTTACGCAATGGGAAGATTTGAAGAAGCATGGGGAAAAGATTGTTTAGAGTTCAAACCAGAGAGATGGATTTCTGAAAAAAGAGAAGTAAAGCACGTTTCATTTTATAAGTTTTTTATTTTTAATGCAGGTCCTAGGACATGCTTGGGAAAAGATGTTGCTCTTTTTCAAATGAAAATAGTGGCAGCTGCTATTTTGCGCAACTATCATATACAAGTGGTGGAAAATCATCCTGTTGTCCCAGCTCAATCGATTATGCTTCTTATGAAGCATGGCTTGAAGGTTAACATAACAACAAGACAAGTTTAG 1524 0.3852 MAMLFPYAATIIVSAFLFLYVHHRRRNSCRTPLLTDWPILGMSPQFFGNMWQFHDYVTNALRKKGGTGELMGPWFTEDNYIVTCDPLNVHHIMSKNFYNYVKGSKFREIFEPFGNGLIGADTEMWKYKRALTQSVLRKLSFETMSEKTIQKKVQNGLLPILDHACLHEKVLDLQDVFSRLMFDETSIMVLGYDPKSLSVEFPLVSAEKAFNEVQECIFYRNMVPITLWKFQEWLQIGSEKKLTKARKIFDQFVYSHIAAKRQELKNSKCNKFSDDLLSEQMMLTDENGKFVHDDKFLRDASFNHFAAGRDTITSGLTWFFWLLAKHPSVEVKILEEIKENFDAIDGKKHEVLGIEDVKKLVYLHGALCESLRLFPPVPVERKQSLKSDTLPSGHRVNPNTYILLFTYAMGRFEEAWGKDCLEFKPERWISEKREVKHVSFYKFFIFNAGPRTCLGKDVALFQMKIVAAAILRNYHIQVVENHPVVPAQSIMLLMKHGLKVNITTRQV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272189g00005 507 SUPERFAMILY Cytochrome P450 35 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 Gene3D Cytochrome P450 21 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 CDD CYP86A 69 498 - -
Stsc272189g00005 507 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00005 507 PANTHER CYTOCHROME P450 24 500 - -
Stsc272189g00005 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272189g00005 Stsc-Chr272189 19104 20627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272189g00005 3 505 Cytochrome P450 AT4G39490 44.380 3.23e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272189g00005 - - gmx:100780625 630.557