Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272189g00003 ATGGGCCCCGAGTTTCGCGAGATCTTCCAACCTTCCGGAGAAGATTTTCTCTCCGCAGATTCTGAGGCTTGGAAAGGCTCGAGGACATTGTTTCATTCCTTGTTCCAGAAAAAGAGTTTCGAGCCCATGTTGGAAAAAAACATTCAGAAGAAGGTTCTGAATAGCTTGCTTCCGATATTTGATCATACATGGTTGCATGGGAAGGTTTTGGATCTTCAAGATGTGTTCAGTCGATTAATGTTCGACGAGACATGCCTCATGCTATTAGGATATGATCCTAATAGTCTCTCAATCGACTTTCCATTGGTCGAAGTTGAGAAGGCTTTCGATGAGGTTGAGGAGTCCATATTCTATAGGCAAACTGTGCCAAGAAGTATTTGGAAGTTTCAAGAATGGCTTCAAGTTGGTGAAGAGAAGAAGATGACAAAAGCGTGTAAAGTTTTTGACCAATTTCTATATTCATTCATTGCCACTAAGCGCCAAGAGTTAAGTAAATGCAACAAGAGTAGTGATGACCTCCTCAGTGGTCTCATGATGGAAGAAGAAAACGATAAAAAGGTGCATGATGATAAATTTCTAAAATATGCTCTATTCAATCTTTTCGTAGCTGGAAGAGATACTATAACTTCGGCTTTTACATGGTTTTTTTGGCTTGTTGCAACACACCCATCAGTGGAGGCCAAGATTCTCGATGAAATAGAAGAAAATTTTGGTGCCACTAGCAAGGAAAAACGCCAAGTCTTAGGGATTGAGAATGTGAAGAAGCTAGTTTATCTACATAGTGCTCTGTGTGAAAGTTTGAGGTTGTTTCCACCTATTCCTATTGAACGTAGAAAATCACTAAAATGTGATACACTTCCTAGTGGCCATCGTGTTAATCCAGATACACCTATTTTGTTGTTTGCTTACGCAATGGGAAGATCTGAAGAGATATGGGGAAAAAATTGCTTGGAAGTCAAGCCAGAGAGATGGATTTCCGAAAAAATAGTGGCAGCTGCTATTTTGCGCAACTACCATATACAAGTGGTGGAAAATCATTCTATTAGTCCAGCTCACTCGATTATGCTTCTTATGAAGCATGGCCTAAGGGTTAACATATCAAGGAGACAAATTTAG 1116 0.3996 MGPEFREIFQPSGEDFLSADSEAWKGSRTLFHSLFQKKSFEPMLEKNIQKKVLNSLLPIFDHTWLHGKVLDLQDVFSRLMFDETCLMLLGYDPNSLSIDFPLVEVEKAFDEVEESIFYRQTVPRSIWKFQEWLQVGEEKKMTKACKVFDQFLYSFIATKRQELSKCNKSSDDLLSGLMMEEENDKKVHDDKFLKYALFNLFVAGRDTITSAFTWFFWLVATHPSVEAKILDEIEENFGATSKEKRQVLGIENVKKLVYLHSALCESLRLFPPIPIERRKSLKCDTLPSGHRVNPDTPILLFAYAMGRSEEIWGKNCLEVKPERWISEKIVAAAILRNYHIQVVENHSISPAHSIMLLMKHGLRVNISRRQI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272189g00003 371 Gene3D Cytochrome P450 2 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00003 371 SUPERFAMILY Cytochrome P450 8 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00003 371 Pfam Cytochrome P450 11 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00003 371 PRINTS E-class P450 group I signature 192 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00003 371 PRINTS E-class P450 group I signature 212 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272189g00003 371 PANTHER CYTOCHROME P450 2 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272189g00003 Stsc-Chr272189 6004 7215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272189g00003 2 369 Cytochrome P450 AT4G32170 38.329 3.64e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272189g00003 - - gmx:100780625 466.463