Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272188g00003 ATGGAATCTTTTACTTCAGATCGATCAGTGGATTTGGAATCAGATCTTTCATGTGAATCAGAGAATACAGGACAGTTTTTATGTGATGTTGATGACGAGTATGTGCCGAAGGTTGGCATGCTTTTCGAATCTCTTGAGGCAGCTAGGATTTTTTATAGGGATTATGCTAAACGCGCAAACTTCTCTACAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAAATTCTAAACCAGCTTCTTTCATGTAATAGAGAGGGGAAAAGGAGGTCCGAGTTAGTAGTTTCAGAGAAGACAAATCCTATATTCGCTGCTAATTGTCCAGCGAGAGTTTATGTGCATCATTTGAAGATAATTGGATTTTGGGAGATATCAAAGATGGTTTTAGGACATTCACACCCTTGCTGTCCAAATCAAGCAGAATTGTTTCCCCAATACCGAGAGCTGAGCATGCATGTTCGTCGGACCATTGAGATCAACGATTAA 489 0.3865 MESFTSDRSVDLESDLSCESENTGQFLCDVDDEYVPKVGMLFESLEAARIFYRDYAKRANFSTKIRNTNKSKKSNEILNQLLSCNREGKRRSELVVSEKTNPIFAANCPARVYVHHLKIIGFWEISKMVLGHSHPCCPNQAELFPQYRELSMHVRRTIEIND 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272188g00003 162 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 162 - -
Stsc272188g00003 162 Pfam FAR1 DNA-binding domain 51 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272188g00003 Stsc-Chr272188 17688 19299 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc272188g00003 FAR1 2.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272188g00003 - - adu:110280446 177.178