Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272184g00010 ATGTGTCATCAGACTATTGCTTTTGTTTCTATGGGTGAAGTTAATAATCTTATTGCTTTCTCTAAATTTGCAGTCATGCATGATTTGCGAATGATCCACACTGACCTGAAGCCTGAAAACATACTTCTAGTTTCTCCCGAGTATGTTAAAGTTCCTGATTACAAGAGTTCATCAAGATCACCAAGTTCTTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACTACTTATGAGCGAGAAGATCAGAGTTACATTGTATCAACTCGACACTATAGGGCACCAGAAGTTATCATTGGACTGGGATGGAGTTACCCATGCGATATATGGAGTGTGGGGTGTATATTGGTTGAGTTATGCACGGGTGAAGCTTTGTTTCAGACCCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGACCATTACCTCAGCACATGCTAAAGAGAGTAGAGTAA 483 0.4079 MCHQTIAFVSMGEVNNLIAFSKFAVMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQSYIVSTRHYRAPEVIIGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272184g00010 160 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00010 160 Coils Coil 158 160 - -
Stsc272184g00010 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00010 160 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 23 159 - -
Stsc272184g00010 160 Pfam Protein kinase domain 24 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00010 160 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Stsc272184g00010 160 SUPERFAMILY Protein kinase-like (PK-like) 25 158 IPR011009 -
Stsc272184g00010 160 Gene3D Transferase(Phosphotransferase) domain 1 23 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272184g00010 Stsc-Chr272184 47928 49249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272184g00010 75 155 EF-hand Containing Proteins AT5G22840 40.230 9.79e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Stsc272184g00010 Pkinase 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272184g00010 K08287 - gmx:100804452 268.47