Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272184g00009 ATGTGTCATCAGACTATTGCTTTTGTTTCTATGGGTGAAGTTAATAATCTTATTGCTTTCTCTAAATTTGCAGTCATGCATGATTTGCGAATGATCCACACTGACCTGAAGCCTGAAAACATACTTCTAGTTTCTCCCGAGTATGTTAAAGTTCCTGATTACAAGAGTTCATCAAGATCACCAAGTTCTTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACTACTTATGAGCGAGAAGATCAGAGTTACATTGTATCAACTCGACACTATAGGGCACCAGAAGTTATCATTGGACTGGGATGGAGTTACCCATGCGATATATGGAGTGTGGGGTGTATATTGGTTGAGTTATGCACGGGTGAAGCTTTGTTTCAGACCCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGACCATTACCTCAGCACATGCTAAAGAGAGTAGACCGACATGCGGAGAAGTATGTTAGAAGAGGTAGATTAGACTGGCCAGAGGGTGCAACTTCCAGGGAGAGTATTAAAGCTGTTATGAAGCTTCCTAGGCTACAGAACCTTATCATGCAGCATGTTGATCACTCGGCTGGCGATCTTATACACCTCTTGCAGGGGTTGCTTAGATATGACCCCTCAGAAAGACTTACAGCCAGGGAAGCTCTAAGACATTCTTTCTTCATGAGAGATTACCTTAGGAGATGA 729 0.4266 MCHQTIAFVSMGEVNNLIAFSKFAVMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQSYIVSTRHYRAPEVIIGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAREALRHSFFMRDYLRR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272184g00009 242 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00009 242 FunFam Serine/threonine-protein kinase AFC2 10 235 - -
Stsc272184g00009 242 Gene3D Transferase(Phosphotransferase) domain 1 23 235 - -
Stsc272184g00009 242 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 23 237 - -
Stsc272184g00009 242 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00009 242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Stsc272184g00009 242 Pfam Protein kinase domain 24 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272184g00009 242 SUPERFAMILY Protein kinase-like (PK-like) 25 238 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272184g00009 Stsc-Chr272184 47396 49340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272184g00009 75 235 EF-hand Containing Proteins AT5G22840 30.899 9.89e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Stsc272184g00009 Pkinase 7.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272184g00009 K08287 - gmx:100804452 427.943