Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272184g00008 | ATGCATGATTTGCGAATGATCCACACTGACCTGAAGCCTGAAAACATACTTCTAGTTTCTCCCGAGTATGTTAAAGTTCCTGATTACAAGAGTTCATCAAGATCACCAAGTTCTTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACTACTTATGAGCGAGAAGATCAGAGTTACATTGTATCAACTCGACACTATAGGGCACCAGAAGTTATCATTGGACTGGGATGGAGTTACCCATGCGATATATGGAGTGTGGGGTGTATATTGGTTGAGTTATGCACGGGTGAAGCTTTGTTTCAGACCCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGACCATTACCTCAGCACATGCTAAAGAGAGTAGACCGACATGCGGAGAAGTATGTTAGAAGAGGTAGATTAGACTGGCCAGAGGGTGCAACTTCCAGGGAGAGTATTAAAGCTGTTATGAAGCTTCCTAGGCTACAGAACCTTATCATGCAGCATGTTGATCACTCGGCTGGCGATCTTATACACCTCTTGCAGGGGTTGCTTAGATATGACCCCTCAGAAAGACTTACAGCCAGGGAAGCTCTAAGACATTCTTTCTTCATGAGAGATTACCTTAGGAGATGA | 654 | 0.4388 | MHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQSYIVSTRHYRAPEVIIGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAREALRHSFFMRDYLRR | 217 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272184g00008 | 217 | PANTHER | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED | 1 | 212 | - | - | |
Stsc272184g00008 | 217 | FunFam | Serine/threonine-protein kinase AFC2 | 1 | 210 | - | - | |
Stsc272184g00008 | 217 | Pfam | Protein kinase domain | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272184g00008 | 217 | SMART | serkin_6 | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272184g00008 | 217 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 210 | - | - | |
Stsc272184g00008 | 217 | ProSiteProfiles | Protein kinase domain profile. | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc272184g00008 | 217 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 213 | IPR011009 | - | |
Stsc272184g00008 | 217 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 6 | 18 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272184g00008 | Stsc-Chr272184 | 47396 | 50470 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272184g00008 | 50 | 210 | EF-hand Containing Proteins | AT5G22840 | 30.899 | 3.20e-18 | 80.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CLK | Stsc272184g00008 | Pkinase | 1.9e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272184g00008 | K08287 | - | gmx:100804452 | 426.787 |