Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272182g00008 ATGAATGCCTCAAAGTGCAAAATGCGGTTTTTGATGATGATAGTGTGTAGTTTGTTATGGAATGGTGTAATGGCGTCAAGTGATGAGAGCAGTGGGAGTTACCTTGATCAAACACCAACTTGGGCTGTGGCTTCTGTCTGCACTGTTTTCATCTTAATCTCCATTGTTCTTGAGAAGGGCCTTCACAAAGTTGGAACGTGGCTAAATGATAGGCAAAAGAGGGCTCTGCTTGAAGCTCTAGAAAAAGTCAAAGCTGAATTGATGGTTCTAGGCTTCATTTCTCTGCTTTTGACATTCGGGCAGAGTTACATTGTTCGAATTTGTATTCCTGGCAGTGCGGCGGACAAACTGTTGCCATGTAAATATGTAGGTACCGGCGATGCGAGTAGCGACGAAAATAAACATGGTAGGAGACTTCTCTCTTATGAACACAGATTTCTATCAGAAGATACAGTTTATAAATGCAAGGAGGGATACGTGCCGCTTATATCGAGCAACGGATTGCACCAGTTACACATCCTCATATTCTTCTTGGCAGTTCTTCATGTGCTTTACAGTGCTCTCACTATGCTTCTTGGGAGACTGAAGATACGCGGATGGAAGGCATGGGAGGCAGAGACTTCATCTCATGGCTACGAGTTTGCTACTGATGCTTCGAGATTCCGGCTAACTCACGAAACATCGTTTGTTAAAGCCCATGCAACTTTTTGGACTAGAAATCCCTTCTTCTTCTATATTGGTTGCTTCTTCCGGCAGTTTTATAGGTCTGTTGGTAAAGCTGACTACCTAGCTCTTCGCAATGGCTTTATCAGTGTCCATCTGGCTCCCGGAAGTAAATTTAACTTCCAAAAGTATATCAAAAGATCCTTGGAGGATGACTTCAAGATAGTTGTTGGAGTCAGTCCTGTCCTCTGGGCATCGTTCGTCATTTTTCTTCTACTAAATGTTAATGGATGGCATGCTATGTTTTGGGCATCCTTAATTCCCGTTGTCATAATTTTGGCGGTCGGAACAAACCTTCAATCCATCTTAGCAAAGATGGCTATAGAAATCACCGAAAAGCATGCTGTTGTCCAAGGGATTCCTCTTGTTCAGGGTTCGGACCAATATTTTTGGTTTGGTCGGCCTCAGTTAGTTCTTCATCTTATTCACTTTGCTTTGTTCCAGAATGCATTCCAAATAACATATTTCTTGTGGATATGGTACACTTTCGGGTTGATAAACTGTTTCCATGCTGACTTCAAGCTTGCAATAATTAAAGTAGTTTTAGGGCTTTTAGTGCTATGCCTGTGCAGTTATATCACGCTTCCGTTATACGCTCTTGTTACTCAGATGGGGTCAAGAATGAAGAGATCAATATTTGATGAACAAACATCTAAGGCCCTGAAGAAATGGCACATGGCTGTGAAAAAGAAGCATGGAGCGAGGCTAGGGAAGTCAACCGTGCGAACCTTGGACGAAGGAAGCACCATTGGTTCGACGATGAATTCTTCGGGACCAACACTACACCGGTTCAAGACCACCGGCCACTCGACACGAACCTCTTCATCCTACGAGGACCGTGAGGATGATGATTATCGATCTGATACTGAATTGACTCCCATTTCACCAAGATCAAGCTTGATAGTCAGAGTGGATAATGGTGATCATCAACAAGAAGAAGAAGCAAAAGAAAATAGACACCCCATTGTGGGAGAACAAACCAATAATGGTATTGGAGGTTAA 1725 0.4296 MNASKCKMRFLMMIVCSLLWNGVMASSDESSGSYLDQTPTWAVASVCTVFILISIVLEKGLHKVGTWLNDRQKRALLEALEKVKAELMVLGFISLLLTFGQSYIVRICIPGSAADKLLPCKYVGTGDASSDENKHGRRLLSYEHRFLSEDTVYKCKEGYVPLISSNGLHQLHILIFFLAVLHVLYSALTMLLGRLKIRGWKAWEAETSSHGYEFATDASRFRLTHETSFVKAHATFWTRNPFFFYIGCFFRQFYRSVGKADYLALRNGFISVHLAPGSKFNFQKYIKRSLEDDFKIVVGVSPVLWASFVIFLLLNVNGWHAMFWASLIPVVIILAVGTNLQSILAKMAIEITEKHAVVQGIPLVQGSDQYFWFGRPQLVLHLIHFALFQNAFQITYFLWIWYTFGLINCFHADFKLAIIKVVLGLLVLCLCSYITLPLYALVTQMGSRMKRSIFDEQTSKALKKWHMAVKKKHGARLGKSTVRTLDEGSTIGSTMNSSGPTLHRFKTTGHSTRTSSSYEDREDDDYRSDTELTPISPRSSLIVRVDNGDHQQEEEAKENRHPIVGEQTNNGIGG 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272182g00008 574 MobiDBLite consensus disorder prediction 488 574 - -
Stsc272182g00008 574 Pfam Mlo family 34 485 IPR004326 GO:0006952|GO:0016020
Stsc272182g00008 574 PANTHER MLO-LIKE PROTEIN 1 30 550 IPR004326 GO:0006952|GO:0016020
Stsc272182g00008 574 MobiDBLite consensus disorder prediction 488 514 - -
Stsc272182g00008 574 MobiDBLite consensus disorder prediction 547 562 - -
Stsc272182g00008 574 MobiDBLite consensus disorder prediction 515 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272182g00008 Stsc-Chr272182 46476 51943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272182g00008 23 560 MLO family AT2G17480 64.545 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272182g00008 K08472 - gmx:100788020 865.144