Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272181g00005 ATGGCACCTCTCATTGTTGATACAAAATATGTTGTATTTGTCAAAGCATCAAAGCGTATTCCTTCCTCTATTCTTTCTCTATCTACACTTGACAATAGACCTGACCTTAATATGCTATGCCATATCATTCATGTTTATCAATCCCAAAAAGATGATGGTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGCTAAAAGAAGCACTCTCAAAGGCCTTGTCCTATTACTACCCTCTTGCCGGTAAGCTAGTCAAACATGATGATGACAAGTTTAGAGTCCATTACAATTCCAATGATGGAGTCCCATTTATAGAAGCAAATGCTAATTGCAATCTTTCTTCTCTTCATTACCTTGATAGTAGTGAAGACATGAAAATTGCAAAAGACTTGGCCTTTGAGCCTCCTTCACAAGATGATCAAAATGGTCACCAATGCCCTATAATAGGGTTTAAGGTGACCAAGTTTCTATGTGGGGGATTCACAATTGGAATTGGAGCCTCACATGTTGTATGTGATGGATTTGGAGTATCTCAATTTCTTCATACCGTAATTGAGTTAGCAAGAGGAAGAAGCGAGCCGTCGATAAAACCCATTTGGGACAGGCATAGGCTGATGGGATCACTTACCAAAACGCCCGTGCCGAGTCCCATCGATAATCCCTCGGCCGCAGTTTCACCTTATCTTCCTACCACAAAACTCATCCATGAATGCTTTAAGGTGGATGGAGAGAGCATAAAAAAACTCAAAATGAGTTTGACCAAAGAATTCAATAATCAAAATAACATTAAGACCATGAATGAAATTGTAACAAATTTTGAAGCACTCTCTGCTTATACTTGGAGGGCAAGGGCCAAAGCTTTGAAACTAAACTATGATGGAAAAACCATGCTTGGTATATTAGTTGGAGCAAGAAGACATGTGGATCCTCCATTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTAACAGTTAAAGAACTCATTGAGAAGCCACTCTCACAAGTTGTGAAGCACATCAAAGAGACCAAGAAACTTGCTTTTACAAGAAGTTACATCATGGATTCAATCAACACGTTGGTGACAAAAGAACAAGATTACAATGTGGATGGTATTGGTGCATATTTTAACTTGACGGAATGGAAGCATTTGGGTTTCATGGAAAACATGGATTTTGGAGGGAATGTTCTTGTGAACTTCTTACCAGCACCATGCAACATGTTTGCCGATGTTGATTTGTGCATTTTTGCACCTCCTTGTAAGTTGGATTATTCATCAATCAAAGGTGGAGGAATTAGGGTTTTTGTGTCTCTTCCAAGTGCTGCCATGGCCAAGTTCAGGGAGGAGATGGAAGCTCTTACACTTCTTAATGATATTTGA 1398 0.3941 MAPLIVDTKYVVFVKASKRIPSSILSLSTLDNRPDLNMLCHIIHVYQSQKDDGYPNDQIDPNPINVLKEALSKALSYYYPLAGKLVKHDDDKFRVHYNSNDGVPFIEANANCNLSSLHYLDSSEDMKIAKDLAFEPPSQDDQNGHQCPIIGFKVTKFLCGGFTIGIGASHVVCDGFGVSQFLHTVIELARGRSEPSIKPIWDRHRLMGSLTKTPVPSPIDNPSAAVSPYLPTTKLIHECFKVDGESIKKLKMSLTKEFNNQNNIKTMNEIVTNFEALSAYTWRARAKALKLNYDGKTMLGILVGARRHVDPPLPEGYYGNAIVDANVVLTVKELIEKPLSQVVKHIKETKKLAFTRSYIMDSINTLVTKEQDYNVDGIGAYFNLTEWKHLGFMENMDFGGNVLVNFLPAPCNMFADVDLCIFAPPCKLDYSSIKGGGIRVFVSLPSAAMAKFREEMEALTLLNDI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272181g00005 465 Gene3D - 230 456 IPR023213 -
Stsc272181g00005 465 PANTHER ACYL TRANSFERASE 4 6 458 - -
Stsc272181g00005 465 Gene3D - 4 215 IPR023213 -
Stsc272181g00005 465 Pfam Transferase family 8 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272181g00005 Stsc-Chr272181 28596 30104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272181g00005 65 399 Monolignol Biosynthesis Gene Families AT5G48930 27.714 3.49e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272181g00005 K20240 - gmx:100801843 481.1