Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272175g00007 ATGATACTAGATGAGTGGAAAAGGCTGTACTCAAACACCAAAACCAATTTCCGAGAAGTTGCAATCAAAGGATTTTGGAACATGTATGATCCAGAGGGATACTCTCTGTGGTTCTGTGACTACAAATACCAAGATGAAAACACTGTTTCCTTTGTTACAATGAACAAGGTTGGTGGTTTTCTTCAACGGATGGATTTGGCCCGTAAGTATGCATTTGGAAAAATGCTTGTGATTGGATCACAACCACCTTTCAAGGTTAAGGGCTTGTGGCTTTTCCGTGGGACAGAAATCCCGAAATTCGTGCTTGATGAATGCTATGATATGGAGCTTTATGAATGGACTAAGGTTGACATATCTGATGAGAATCAAAAGGAGCGGGTCAATCAGATGATTGAAGATGCTGAACCGTTTGAGGGAGAGCCTCTTTTGGATGCCAAGTGCTTTAAGTGA 450 0.4133 MILDEWKRLYSNTKTNFREVAIKGFWNMYDPEGYSLWFCDYKYQDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGTEIPKFVLDECYDMELYEWTKVDISDENQKERVNQMIEDAEPFEGEPLLDAKCFK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272175g00007 149 Pfam Elongation factor 1 gamma, conserved domain 1 96 IPR001662 GO:0003746|GO:0006414
Stsc272175g00007 149 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 1 149 IPR036433 GO:0003746|GO:0006414
Stsc272175g00007 149 SMART EF1G_2 1 96 IPR001662 GO:0003746|GO:0006414
Stsc272175g00007 149 FunFam Elongation factor 1-gamma 1 1 149 - -
Stsc272175g00007 149 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 1 149 IPR001662 GO:0003746|GO:0006414
Stsc272175g00007 149 SUPERFAMILY eEF1-gamma domain 2 149 IPR036433 GO:0003746|GO:0006414
Stsc272175g00007 149 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 149 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272175g00007 Stsc-Chr272175 50831 51898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272175g00007 1 149 Eukaryotic Initiation Factors Gene Family AT1G57720 87.248 8.05e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272175g00007 K03233 - cpap:110809949 302.367