Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272167g00006 ATGGAGCGCTACGAGATTATCAAAGATATTGGTAGTGGAAACTTTGCTGTGGCCAAATTGGTGAGAGACAATTTCACCAAAGAGCTTTTCGCTGTTAAGTTCATTGAGAGAGGCTACAAGATTGATGAGCATGTTCAGAGGGAGATCATGAATCACAGGTCCTTGAAACATCCCAATATTGTTAGATTCAAAGAGGTGCTTTTGACTCCAACACATCTAGCTATAGTAATGGAGTATGCTGCTGGAGGAGAACTCTTTGAGAGGATATGCAATTATGGTAAATTTGGCGAGGATGAGGCGAGATTTTTCTTTCAGCAATTGATATCAGGGGTTAGCTATTGTCATTCAATGCAAATCTGTCATAGAGATCTGAAACTCGAAAACACCCTTCTAGACGGAAGCACTGCACCGCGAGTCAAAATTTGTGACTTCGGTTATTCAAAGTCATCTGTGTTGCATTCACAACCAAAGTCTACAGTAGGAACTCCAGCTTACATCGCACCTGAGGTCCTGACAAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGTTATTTGGGACTTACCCTTTTGAAGATCCAGCCGATCCTAGAAATTTCAAGAAAACTATTGGGAGGATACTCGGTGTCCAGTATGTAATTCCTGATTCTGAAGGAGTTTCCTGGGAATGTAGACATCTTCTATCACAAATTTTTGTGGCGAATCCTGAACAGAGAATTACAATACCGGACATTAAAAACCATCCATGGTTTTTGATGAACTTGCCTATAGAGCTAATGGAAGGTGGAAGCTGGCTAAGCAGCGACGTAAATGATCCATCGCAGAGCGTCGAGGAAGTACTTTCCATTCTACAAGAGGCAAGAAAGCCTCTTAATGTACCCATGGTTGGTCATGACCTAGTTACAGAAGGAAGCATGGACCTCGATGATTTATTAGATGCAGACGCAGATGCAGATCTTGAAGATTTAGAAACAAGTGGCGAGTTTGTGTGCCCTCCTCTTTAA 1032 0.4176 MERYEIIKDIGSGNFAVAKLVRDNFTKELFAVKFIERGYKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNYGKFGEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLFGTYPFEDPADPRNFKKTIGRILGVQYVIPDSEGVSWECRHLLSQIFVANPEQRITIPDIKNHPWFLMNLPIELMEGGSWLSSDVNDPSQSVEEVLSILQEARKPLNVPMVGHDLVTEGSMDLDDLLDADADADLEDLETSGEFVCPPL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272167g00006 343 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Stsc272167g00006 343 PANTHER SERINE/THREONINE KINASE 2 276 - -
Stsc272167g00006 343 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Stsc272167g00006 343 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Stsc272167g00006 343 SUPERFAMILY Protein kinase-like (PK-like) 1 268 IPR011009 -
Stsc272167g00006 343 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272167g00006 343 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272167g00006 343 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Stsc272167g00006 343 CDD STKc_SnRK2 3 259 - -
Stsc272167g00006 343 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272167g00006 343 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Stsc272167g00006 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272167g00006 Stsc-Chr272167 38069 41307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272167g00006 3 270 CBL-interacting serine-threonine protein kinases AT4G24400 40.794 4.09e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc272167g00006 Pkinase 2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272167g00006 K14498 - gmx:100798091 591.652