Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272158g00004 ATGTCTTCCACCCAAACCACCTCCTTCTTTTCCCTCTCCATCTTCTTCATATTCATCGCCCTCTTTCTCTACCATTTCCACTTTCAATCTCAACCTTCTTCCCCTGACGCATCCCAAACCCTACCCCCAAATTCCACCCACCACGGAACCCCCTCTCGCCGCAACTACATCGTGCGCTTCCGCCACTACAAGACCGCCGCCCACCACCGCTCCTATCTGGAATCCAACCTCCGATCCCGAGGCTGGCACTGGATCCACCGCCACAACCCTGCCGCGAAGTTCCCCACCGACTTTGCGTTGGTTTCTGTTGAAGATTCTGTTAAGGATGGATTCAGCCGAGAGATTCAGGCTCTGCCTCTGGTGAAGGACGTACATGTGGACATGAGCTACACCAGGGGTCTTCTCCACAAGGATCGCACCCACAAAGGCAAAGCCGGTTCCTTTGTCGATGGCAAGAAGCGCCCTGGCAAGATATTCACGTCCATGTCGTTTTCTGAGGAGCCTTATCGAGATGGAGATGATGCACCGCCCCATTGCTCCTTCACTCGCAACTCTTCCGTTAAGTTGGGAAGGCAACTCTTTATGCAGAAATCTCAAGTGACTTCCATGTTTGGTGCGGAGGATCTCTGGGCAAAAGGGTACACTGGTGCGAAAGTCAAAATGGCTATATTTGATACAGGCATTCGAGCTGATCACCCTCATTTTCGTAACATCAAGGAACGTACAAATTGGACCAATGAGGATACGTTAAATGATAATCTTGGACACGGGACCTTTGTCGCTGGTGTTATTGCTGGGGTAGATGCAGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGGGTGTTCACTGATGCACAGGTTTCATACACATCATGGTTCCTTGATGCCTTTAACTATGCAATTGCAACCAATATGGATGTGCTGAACTTGAGCATTGGTGGGCCTGATTATTTGGATCTTCCATTTGTTGAGAAGATATGGGAAATAACAGCAAATAATGTAATCATGGTCTCTGCAATTGGAAATGATGGACCGCTTTATGGAACTTTGAATAATCCAGCTGATCAAAGTGATGTTATTGGCGTTGGTGGCATTGACTATAGTGACCATATTGCTTCATTTTCCTCACGTGGCATGAGTACCTGGGAACTTCCTCATGGTTATGGTCGTGTGAAGCCAGACATTGTTGCATATGGACGGGACATAATGGGTTCCAAGATTAGCAAGGGTTGCAAAAGTTTATCAGGAACAAGTGTAGCAAGTCCTGTAGTTGCCGGTGTTGTATGCTTGCTTGTAAGTATCATTCCTGAATCGGATCGAAAAGATATCTTAAACCCAGCAAGTATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTCTCTGGGCCTAACATGTTTGAGCAAGGTGCTGGCCGAGTTGATTTGCTAGAATCATATGGGATTCTTAAGAGCTACAAGCCTAGGGCAAGTATCTTCCCCAACATCCTTGATTATACAGATTGTCCTTACACATGGCCTTTTTGTCGCCAGCCACTCTATGCAGGATCTATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATTGGCTATGTCGAAGGGCCACCGACATGGCATCCTTCTGATGAAGTAGGGAATCTTTTAAGCATTCATTTTACACATTCAGAGATTATCTGGCCTTGGACTGGTTATTTAGCACTTCACATGCAAATCAAGGAAGAAGGTGCCCAGTTTTCTGGAATCATAGAAGGCAATGTAACCCTTAAAGTTTCTAGCCCACCTGCTCAAGGAGAGAACCCTCGAACTAGCATTTGTGTGCTTCAATTGAAATTGAAAGTGGTACCAACACCACCTCGATCCAGACGAATTTTGTGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTACATTCCTAGAGATTCCTTGGATGTTCGAAATGATATTCTTGACTGGCATGATCTTGAAGACGAGTACTTCCCTGAGGAGATTGAGAAACTTAGAGACGATGTCATGTATACTGGGTTGGGGCTAGCCATCTTTGCTGAGTGGTATAATGTAGATACTATGGTGAAGATGAGATTCTTTGATGACAATACACGAAGTTGGTGGACCCCTGTTACTGGAGGATCAAATATTCCAGCACTGAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGTGACAAGATCCTGAATGGTGATTTTTCACTTTTAGGCGAGCAAAGCCGATATGCTTCTGGAACAAATATTGTACGGTTTCCAAGAGGTGGCCATGTACACAGCTTTCCCTTCTTGGATAGTTCTGAGAGCGGAGCCACTCAGAATGTGCTGTTGAATTCCGATACCAAACCCAACTCTCCAATTCTTGGTTTCACAGAGATGGGTCAAGGTCGTGTGGCTGTTTACGGGGATTCGAATTGTTTGGACAGTAGCCATATGGTCACTAATTGTTACTGGCTCCTAAAGAAGATGCTTGACTTTACGAGTACAGACACAAGGGATCCTGTGCTTTTCTCCCACTCAGTCAAACTAGACACTTCGTTGTATGAAGATGATAATCAATTGCCGTCTCGGAGAACTGATGTCAATTTCTCAACCTATTCAGTGGTTGTGGGGAAGGATTTGATTTGCCGATCTGACACGCGATTTGAAGTATGGGGAACCAAGGGCTACAGTTTGCAGGTTCGAGGAAGAACAAAAAAGTTGCCTGGTTATCCTCTCATTGATTTGGGAAGAGGGTTGAATTCAAGTTTGGATACTTCTACCAGAAGTAATCGAATATTTAACACAAGGAACAAGGTTGACTCCTTTGGGAATACGTACTTGGGCCTATTCTATGGAGATGAGCTTGATGCACCTAAGCTTGTTGGTATTAACTGGCTTGTACCAGCTGTAGTTGCAGCATCGGGTTTTCTGCTACTGTGTTTTTGGCGCATTCGGCAAAAGCGACGGCGACGAAGGAAAGGATCAGGCTCTGGTAGATTGTCCACCTTATTGTAG 3024 0.4544 MSSTQTTSFFSLSIFFIFIALFLYHFHFQSQPSSPDASQTLPPNSTHHGTPSRRNYIVRFRHYKTAAHHRSYLESNLRSRGWHWIHRHNPAAKFPTDFALVSVEDSVKDGFSREIQALPLVKDVHVDMSYTRGLLHKDRTHKGKAGSFVDGKKRPGKIFTSMSFSEEPYRDGDDAPPHCSFTRNSSVKLGRQLFMQKSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNVIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISKGCKSLSGTSVASPVVAGVVCLLVSIIPESDRKDILNPASMKQALVEGAAKLSGPNMFEQGAGRVDLLESYGILKSYKPRASIFPNILDYTDCPYTWPFCRQPLYAGSMPVIFNATILNGMGVIGYVEGPPTWHPSDEVGNLLSIHFTHSEIIWPWTGYLALHMQIKEEGAQFSGIIEGNVTLKVSSPPAQGENPRTSICVLQLKLKVVPTPPRSRRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHDLEDEYFPEEIEKLRDDVMYTGLGLAIFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGSNIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTNIVRFPRGGHVHSFPFLDSSESGATQNVLLNSDTKPNSPILGFTEMGQGRVAVYGDSNCLDSSHMVTNCYWLLKKMLDFTSTDTRDPVLFSHSVKLDTSLYEDDNQLPSRRTDVNFSTYSVVVGKDLICRSDTRFEVWGTKGYSLQVRGRTKKLPGYPLIDLGRGLNSSLDTSTRSNRIFNTRNKVDSFGNTYLGLFYGDELDAPKLVGINWLVPAVVAASGFLLLCFWRIRQKRRRRRKGSGSGRLSTLL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272158g00004 1007 PRINTS Subtilisin serine protease family (S8) signature 419 435 IPR015500 -
Stsc272158g00004 1007 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Stsc272158g00004 1007 PRINTS Subtilisin serine protease family (S8) signature 216 235 IPR015500 -
Stsc272158g00004 1007 ProSiteProfiles Serine proteases, subtilase domain profile. 192 486 - -
Stsc272158g00004 1007 CDD Peptidases_S8_SKI-1_like 210 466 IPR034185 -
Stsc272158g00004 1007 ProSitePatterns Serine proteases, subtilase family, histidine active site. 256 266 IPR022398 -
Stsc272158g00004 1007 SUPERFAMILY Subtilisin-like 198 479 IPR036852 GO:0004252|GO:0006508
Stsc272158g00004 1007 Gene3D Peptidase S8/S53 domain 186 482 IPR036852 GO:0004252|GO:0006508
Stsc272158g00004 1007 ProSitePatterns Serine proteases, subtilase family, serine active site. 420 430 IPR023828 -
Stsc272158g00004 1007 PANTHER PEPTIDASE S8 44 470 - -
Stsc272158g00004 1007 FunFam subtilisin-like protease SBT6.1 188 482 - -
Stsc272158g00004 1007 Pfam Subtilase family 217 473 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272158g00004 Stsc-Chr272158 22014 27070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272158g00004 290 1004 Subtilisin-like Serine Gene Family AT5G19660 74.574 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272158g00004 K08653 - qsa:O6P43_007922 1557.35