Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272158g00001 ATGGAAAACCGCCTGAAAATGCGAATCTCTCGCATGTTTCGGACATCATTCGGGTCTTGCCGGAACCGCAACATCACGGACGTTATGGAAAAGGCAGTGTTCGCCCCACAACCCAACCTGTTGATGATGGACCCACCTCCACCTCCATCACCAAAACCCCGCCCCTTTCCCTCCATTTGCAGACCCAAATCCTCTCAAACCATCAACGACAATTGCATATTGTCGTTTAACGACTCTCTCCCAAGACGCACCAAAGTCTCCGAGCTCTCATCACCCTTCGCCCTCGATGCCCCCCCCGCAGCACCAAACACTCCCCTCAACACAATCTACGAACACGACTTCAGCTTCTACTACAACACCAACACCAAGACCAAGAAAAAGAAAACGAAGCAGAAGCAGAATAAGAAGAAGAAGAAGAAGAAGATGGTGAATAGCCATAAGAAAAGAGACATGTTCCCGTTTAATTCTTGCGCCAAAGACACAAACTTTGGAGGCTATTGGTGGTATAGCAGCGACGAAGACGACGAAACCGACACGCTTTTCTCCTCCAAGAGCCTCTCTTCCGATTCCTCAATGTCCCGCCGGCGCCACCGTTCTCGCCGGAAAAACCACGGCGGAGAGAGGACCTCCGAGACGGGCGTGATGCCACTGCAGGGGAAGGTGAAGGACACTTTCGCTGTGGTGAAGCGATCCAGTGATCCATACAGTGACTTCAGAACTTCCATGGTTGAAATGATCGTTGAGAAGCAGATATTTTCACCGAATGGTTTGGAGAATCTGTTGCAGTGTTTTCTTTCTCTGAATTCGTATCATCATCATAACATCATTGTAGAGGTCTTCACTGAGATTTGGGAAGCTTTGTTCTCTGACTGG 873 0.4937 MENRLKMRISRMFRTSFGSCRNRNITDVMEKAVFAPQPNLLMMDPPPPPSPKPRPFPSICRPKSSQTINDNCILSFNDSLPRRTKVSELSSPFALDAPPAAPNTPLNTIYEHDFSFYYNTNTKTKKKKTKQKQNKKKKKKKMVNSHKKRDMFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSMSRRRHRSRRKNHGGERTSETGVMPLQGKVKDTFAVVKRSSDPYSDFRTSMVEMIVEKQIFSPNGLENLLQCFLSLNSYHHHNIIVEVFTEIWEALFSDW 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272158g00001 291 MobiDBLite consensus disorder prediction 181 214 - -
Stsc272158g00001 291 NCBIfam uncharacterized plant-specific domain TIGR01568 225 288 IPR006458 -
Stsc272158g00001 291 MobiDBLite consensus disorder prediction 123 146 - -
Stsc272158g00001 291 MobiDBLite consensus disorder prediction 121 150 - -
Stsc272158g00001 291 ProSiteProfiles OVATE domain profile. 227 286 IPR006458 -
Stsc272158g00001 291 Pfam Transcriptional repressor, ovate 231 288 IPR006458 -
Stsc272158g00001 291 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 121 289 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272158g00001 Stsc-Chr272158 4357 5300 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc272158g00001 Ovate 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272158g00001 - - gmx:100776613 328.946