Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272149g00008 ATGCAGCAGACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCGTTGCTTAAGAGATTGGACTTTCCGGAAATGAAGTTCAGCTTATACTTTATGGGTTATGAGAATACAGCAGAAGCTCCCGATAATCCAGTTGATAGAACAGTTTGGACCTTTTCTCAAAAGGCTACAATTGAATTAACACATAATTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGCTACCACAATGGAAATTCCGAACCTCGTGGCTTTGGACACATTGGAATAACTGTCGATGACACCTACAAGGCATGTGAAAGATTTCAGAGTCTAGGAGTAGAGTTTGTTAAGAAGCCAGATGATGGGAAAATGAAAGGCATAGCATTTATCAAGGATCCTGATGGTTACTGGATTGAAATCTTTGACCAAAAAACAATTGGAACTGTAGCAGAAGCTGCTTCTTAA 477 0.3983 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPDNPVDRTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFQSLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDQKTIGTVAEAAS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272149g00008 158 CDD GlxI_Zn 1 145 - -
Stsc272149g00008 158 Gene3D - 1 154 IPR029068 -
Stsc272149g00008 158 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 1 152 - -
Stsc272149g00008 158 ProSitePatterns Glyoxalase I signature 2. 88 104 IPR018146 GO:0004462|GO:0046872
Stsc272149g00008 158 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 3 146 IPR029068 -
Stsc272149g00008 158 ProSitePatterns Glyoxalase I signature 1. 3 24 IPR018146 GO:0004462|GO:0046872
Stsc272149g00008 158 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 147 IPR037523 -
Stsc272149g00008 158 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 144 IPR004360 -
Stsc272149g00008 158 NCBIfam lactoylglutathione lyase 1 149 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272149g00008 Stsc-Chr272149 28509 30507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272149g00008 1 158 Calmodulin-binding Proteins AT1G08110 83.544 8.05e-95 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272149g00008 K01759 - gmx:547667 314.309