Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272147g00011 ATGGATCCCAGTAAGTCCAAGTCAAGGTTCCAAATGCAGGTTTACAAGATGCCTCCGAACCTCAATCGATCCGAGCTCGCGCCACCTAGGAACTGGAAGATAAGTGGTGCAGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTCCAGATCCAACAGGGTTGCCATCAAACACATCTGCAATTGCAAGTTGGCAAATTGTCTGCAACATAACAAGGGACACAACAAGAAAAAGCAAATGCTGTGTCTCATTTTCATCTTTCTTCAATGAATCTGTTGTTCCTTGCCAAACATGTGCTTGTGGTTGCTCTGCAAAGCCAGAGAGGACTTGCAGTGTGGCTGAGCCAGCTTTGCTGCTTCCTCCAGAGGCACTTCTTGTTCCATTTGAGAACAGAACTAAAATGGCTGTTACTTGGGCTGATAGAAAACATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAGTACAGATTACCGGCGAGGTTGGACTGCAAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTCGCAGACTGGTTTGTGGCTGTGGAAATGGATAAAGCAGCTCCTGGTTTTGAGAAAATGTACTCATTCAATGCTAGCTCATTAGACAGTGTGAAGAACACAATATTCATGCAAGGAAAGGAAGGATTGAACTTCCTTGTAGCTGAAGCAAACGGATCTAACCCGAGGAAAGATCCGAAGGTGCCGGGGAAACAACAATCTGTGATCTCATTTAGAAAGAAAGCTACTCCTGGAATTAAAGTGGTAGATGGTGATGGATTTCCCAGTAAAGTATTTTTCAATGGGGAGGAATGTTCTCTTCCATTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTTCCATGATGTTCCTAATGTTGTTGCCAATCATATGGATGTGGCAATAG 975 0.4431 MDPSKSKSRFQMQVYKMPPNLNRSELAPPRNWKISGAELNPEYQCGNPVRVSPSESPDPTGLPSNTSAIASWQIVCNITRDTTRKSKCCVSFSSFFNESVVPCQTCACGCSAKPERTCSVAEPALLLPPEALLVPFENRTKMAVTWADRKHLSVPNPMPCGDNCGVSINWHVSTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDSVKNTIFMQGKEGLNFLVAEANGSNPRKDPKVPGKQQSVISFRKKATPGIKVVDGDGFPSKVFFNGEECSLPLVYPSSGFRNEFSFVSMMFLMLLPIIWMWQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272147g00011 324 PANTHER COBRA-LIKE PROTEIN 7 1 317 - -
Stsc272147g00011 324 Pfam COBRA-like protein 1 79 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272147g00011 Stsc-Chr272147 57310 58754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272147g00011 1 307 COBRA Gene Family AT4G16120 67.628 6.03e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272147g00011 - - vum:124836920 499.59