Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272142g00002 ATGCAAGGAGCAAGTGCAGGCACCACTTTAAGGTTTAACCAATACATGCCAACTCCACGAGCAAGAGGAATCAATACAAGTAAATGGCCAATGCCAAGGTTCATACCACCAGCAAGGACAAATTCTTCCAAAGACAATAACACTGGAGGGTCAAGTGGCAACAACAACTCTACACCTAATAACAACAGCTTCGCCCCCAAAACCGTTCTCCAATTTGACGTTGATGCTGCAGCTGGTAGTATCGTAAATGGATTTGAAGCCACCTCGTCGTTTAGCATACTCTCGTTTCAACTAACTCCCAGAGGCAATGGTAAGCCATTTGGAAGGGCATTCTTCCTCTCCGGTCCAATCCTGAGCGGAGCTATGTGCGGTCCACTTGAGGATGCCGCTATCGCAGAAGGGGGAGGACCTCCTCTTTCGCCGGTGTTCCTTTCTCCGCACCACTGGGCCTGGGCGGGTTGTACGCCAAGAAGAAGCAGAAGAAGCGAATCATTGGGATTAGGAAGGCGTTCCACCGGAGGAGCCTCTCGGAGATGA 537 0.5047 MQGASAGTTLRFNQYMPTPRARGINTSKWPMPRFIPPARTNSSKDNNTGGSSGNNNSTPNNNSFAPKTVLQFDVDAAAGSIVNGFEATSSFSILSFQLTPRGNGKPFGRAFFLSGPILSGAMCGPLEDAAIAEGGGPPLSPVFLSPHHWAWAGCTPRRSRRSESLGLGRRSTGGASRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272142g00002 178 MobiDBLite consensus disorder prediction 1 21 - -
Stsc272142g00002 178 MobiDBLite consensus disorder prediction 158 178 - -
Stsc272142g00002 178 MobiDBLite consensus disorder prediction 39 64 - -
Stsc272142g00002 178 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272142g00002 Stsc-Chr272142 27538 32703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272142g00002 16 170 PP2C-type Phosphatase Gene Family AT1G07630 29.167 5.71e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272142g00002 - - gmx:100775371 78.1814