Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272138g00008 ATGAAGAAGCTCACTGTAACTGTTTCCATTTTCGTGATCTTAACATTCTATCTTCATGAAATCGCTTATGTTTCTTCATCGCCTCTCTTACACCACGCAAAACAGGTTCACGAAGAGAAAGATTCTACTGTAAGAAATCTTGAACAGGATGAAGAGCATGGTGGGGAAGTGCATTGCTCTAGAGAAAGAAGTAGAGCAGCTCGAAAAGTGATAGAACAGTACTTGACACCGTTTGTTGAACGAGAAAACTATCATTTTTCAAGAAATTGCAGACTTCACCCTGAGAATGATATATTCAGGGATCAGGAGGAGCATAAAGTTTTCGTAGACAGGCATGATTGGCGGTGTGGATATTGTAGGAAAATTTTCCATGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTGAATGTAACTCATGATAATTGCTTGGCTGATTTATGTGGAGCATTGCATTGTGATGCTTTCATGAATTCCAAGTCCTCTAGAACAAAGTGTTATCCGGCAGCTGCTGCAAAAAACCGTCACCTATGCGAGAGTCTTGCTGACAGTTGCTTTCCCATAAGCAAGGGGCCATCAGCAAGCCGTCTTCATGAATTGTTTATGCACCAATTTTGTGATGCTCACACCTGCTCAGGGAAACTGAAGCCCTTCTCTAGAGGAGGCAAGGAGCAAAGTGGTTTCTTCCGCCTGGCTGCTGGAGCATTAATCTTGGTGCTACTCCCTGTGTTCTATCTTTTTCTTTTTCTTGTTCAAAGTGATATGAAGGGTCGAACTCAAGAGCTTCGTCGTATCTCAAAAGCACGATGGAAGGTAAAGCCATCATGA 843 0.4176 MKKLTVTVSIFVILTFYLHEIAYVSSSPLLHHAKQVHEEKDSTVRNLEQDEEHGGEVHCSRERSRAARKVIEQYLTPFVERENYHFSRNCRLHPENDIFRDQEEHKVFVDRHDWRCGYCRKIFHEEKFLDQHFDNRHSNLLNVTHDNCLADLCGALHCDAFMNSKSSRTKCYPAAAAKNRHLCESLADSCFPISKGPSASRLHELFMHQFCDAHTCSGKLKPFSRGGKEQSGFFRLAAGALILVLLPVFYLFLFLVQSDMKGRTQELRRISKARWKVKPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272138g00008 280 MobiDBLite consensus disorder prediction 40 59 - -
Stsc272138g00008 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Stsc272138g00008 280 PANTHER ZINC FINGER PROTEIN-RELATED 20 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272138g00008 Stsc-Chr272138 53493 57260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272138g00008 35 280 C2H2 Transcription Factor Family AT5G63280 61.943 5.54e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272138g00008 - - ccaj:109814494 416.772