Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272134g00008 ATGGAGGAGGTTTGGAAGGACATCAACCTTTCTTCTTTGAACAGACCCTCCTCCTCCACCTCTTCCTCCGCCGCCTTCATCTTCCAAGACTTCCTCGCTCGCCCCTTCACCATTAACACCACCACTACTCCCGATCCTCCTCCTCCTCCTTCTCCCTCACCCTCTCCTGCACCCCCGCAATCACTCACTGCTCTCAGCCTCGGTTCTCATCATCGCCATATTAACGGCAATCCTCATTTCCATCATCATCATCATCCTCCTCCACCACCACCTACCTCCACTACCAAGCTACCTTACCCTTCTTCACCATTATTTGTCGATACCCTGCCTTGCTCTTCCTCTCTCCCCCCCTGCTTCCCCGCCATCACTAAGAGGTTCCCTGAACCCTCCTCTTCTGATTCCGCCCCCACCCTCGACCGCCGCAACAAGCGCATGATCAAGAATCGTGAATCCGCTGCCCGATCACGCGCTCGAAAGCAGGAAAAGATTCCTTCTTTCTCCAAATGCATACATGTTTAG 519 0.5376 MEEVWKDINLSSLNRPSSSTSSSAAFIFQDFLARPFTINTTTTPDPPPPPSPSPSPAPPQSLTALSLGSHHRHINGNPHFHHHHHPPPPPPTSTTKLPYPSSPLFVDTLPCSSSLPPCFPAITKRFPEPSSSDSAPTLDRRNKRMIKNRESAARSRARKQEKIPSFSKCIHV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272134g00008 172 MobiDBLite consensus disorder prediction 37 101 - -
Stsc272134g00008 172 MobiDBLite consensus disorder prediction 1 22 - -
Stsc272134g00008 172 MobiDBLite consensus disorder prediction 137 166 - -
Stsc272134g00008 172 MobiDBLite consensus disorder prediction 41 59 - -
Stsc272134g00008 172 Pfam bZIP transcription factor 139 163 IPR004827 GO:0003700|GO:0006355
Stsc272134g00008 172 SUPERFAMILY Leucine zipper domain 140 165 IPR046347 GO:0003700|GO:0006355
Stsc272134g00008 172 Gene3D - 139 166 - -
Stsc272134g00008 172 MobiDBLite consensus disorder prediction 122 172 - -
Stsc272134g00008 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 143 158 IPR004827 GO:0003700|GO:0006355
Stsc272134g00008 172 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 160 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272134g00008 Stsc-Chr272134 41360 42513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272134g00008 1 161 bZIP Transcription Factor Family AT2G17770 36.158 5.25e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc272134g00008 bZIP_1 1.8e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272134g00008 K14432 - gmx:102660922 74.7146