Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272134g00005 ATGCATTTTCATGACTGCTTCATTCGGGGATGCGATGCCTCTGTGCTCCTAAATTCAAAAGGAAACAACAAAGCCGAAAAAGATGGACCACCGAATATTTCTTTGCACGCATTTTATGTCATTGATGCAGCAAAGAAAGCACTAGAAGCTTCATGCCCTGGTGTGGTTTCTTGTGCTGATATTCTTGCTCTAGCAGCAAGGGATGCAGTTTTTCTGTCCGGAGGACCTACATGGGATGTTCCTAAAGGAAGAAAGGATGGTAGAACATCTAAAGCCAGTGAAACAATAAATTTACCAGCACCAACCTTCAACATATCGCAGTTGAAGCAAAGCTTCTCTCAAAGAGGTTTGTCCACAGCAGACCTAATAGCTCTGTCTGGAGGACACACTTTAGGTTTTGCTCACTGCTCATCCTTCAGCAAGAGAGTCCATAACTTTGATGCTACACATGATTGGGACCCTTCAATAAACCCATCATTTGCAGTGCAACTGAAATCAATTTGTCCTTTGAAAAACCGGGCCAAAAATGCAGGCACCATTATGGATCCTTCTTCAACAACTTTCGATAATACATATTACAAGTTGATCCTCCAAAATAAAGCTCTGTTTACTTCTGATCAAGCTTTGATTGATAGCCAAGAGGGAAAAAACCTGGTTTTTAAGTTTGCTGCCTCAAAAAAGGCTTTTTATGAGGCTTTTGTTAACTCCATGATCAGAATGAGCAGCATCAATGGCGGGCAGGAGATTCGGAAGGACTGCAGATTTATCAATTAG 774 0.416 MHFHDCFIRGCDASVLLNSKGNNKAEKDGPPNISLHAFYVIDAAKKALEASCPGVVSCADILALAARDAVFLSGGPTWDVPKGRKDGRTSKASETINLPAPTFNISQLKQSFSQRGLSTADLIALSGGHTLGFAHCSSFSKRVHNFDATHDWDPSINPSFAVQLKSICPLKNRAKNAGTIMDPSSTTFDNTYYKLILQNKALFTSDQALIDSQEGKNLVFKFAASKKAFYEAFVNSMIRMSSINGGQEIRKDCRFIN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272134g00005 257 CDD secretory_peroxidase 1 256 IPR033905 GO:0004601|GO:0042744
Stsc272134g00005 257 SUPERFAMILY Heme-dependent peroxidases 1 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 Gene3D - 1 257 - -
Stsc272134g00005 257 ProSiteProfiles Plant heme peroxidase family profile. 1 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 Gene3D Peroxidase, domain 2 99 240 - -
Stsc272134g00005 257 PRINTS Plant peroxidase signature 55 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 195 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 235 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 74 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 36 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Plant peroxidase signature 120 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Stsc272134g00005 257 PANTHER PEROXIDASE 25-RELATED 1 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Haem peroxidase superfamily signature 74 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 PRINTS Haem peroxidase superfamily signature 121 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272134g00005 257 FunFam Peroxidase 6 117 - -
Stsc272134g00005 257 FunFam Peroxidase 99 240 - -
Stsc272134g00005 257 Pfam Peroxidase 1 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272134g00005 Stsc-Chr272134 23112 24878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272134g00005 1 256 Peroxidase AT5G42180 68.093 3.83e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272134g00005 K00430 - gmx:547873 456.832