Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272134g00002 | ATGGAATTTGTGCCAAATCCGTGCCCTCTGAGATCCTCTGTGTTCGGTTCCTTCGGGGATCTCGTCGAGAGGGTCAAGCAAATTGGAACCCTCGCTGTTTCCGCCGTCATTGGCAACATCTTCTCTGCGATCTTGACCTTCTGCTTCGCATTAGTTGGGACTTTGTTGGGGGCTATGACTGGAGCTTTGATAGGACAAGAGACTGAGAGTGGCTTCATTAGAGGTGCTGCTGTTGGTGCCATATCAGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCATCTCTTGTTCTTTGGCAATCTGATGAGTCCGGAATTGGGTGTCTCTTGTACCTGATTGATGTTATTGCTAGCTTAGTGAGTGGCAGACTTGTTCGTGAAAGGATAGGTCCAGCAATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAACCGGCTTTGATGAAGTTCAAAACATCTTTGACACTGGTGGTTCAAAAGGTTTATCTGGAGACTTGGTGGAAAAGATCCCAATAATCAAAATTACTAGTGACAACAATGTTGATGCTTCTGGTGAGAGAGTGTCTTGTTCAGTTTGCCTCCAGGACTTTCAGCTGGGAGAGACAGTTAGAAGTTTGCCTCATTGCCATCACATGTTTCACCTACCCTGCATAGACAAGTGGCTGTTTAGGCATGGTTCTTGTCCATTATGCAGAAGGGATCTGTAA | 708 | 0.459 | MEFVPNPCPLRSSVFGSFGDLVERVKQIGTLAVSAVIGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLVSGRLVRERIGPAMLSAVQSQMGAVETGFDEVQNIFDTGGSKGLSGDLVEKIPIIKITSDNNVDASGERVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL | 235 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272134g00002 | 235 | FunFam | NEP1-interacting protein-like 1 | 150 | 235 | - | - | |
Stsc272134g00002 | 235 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 151 | 235 | IPR013083 | - | |
Stsc272134g00002 | 235 | SMART | ring_2 | 190 | 231 | IPR001841 | - | |
Stsc272134g00002 | 235 | ProSiteProfiles | Zinc finger RING-type profile. | 190 | 232 | IPR001841 | - | |
Stsc272134g00002 | 235 | SUPERFAMILY | RING/U-box | 189 | 235 | - | - | |
Stsc272134g00002 | 235 | Pfam | Ring finger domain | 189 | 232 | IPR001841 | - | |
Stsc272134g00002 | 235 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 21 | 234 | IPR044523 | - | |
Stsc272134g00002 | 235 | CDD | RING-H2_NIPL1-like | 189 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272134g00002 | Stsc-Chr272134 | 10079 | 12083 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272134g00002 | 21 | 235 | C3H Transcription Factor Family | AT5G66070 | 77.674 | 2.52e-118 | 335 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272134g00002 | - | - | gmx:100807641 | 431.795 |