Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272128g00012 ATGGAAAATTTTCAGCACCATAAACTTCATGCCCTCTTTCTTCTTCTTCTTCAGTTCCACTCATTAGCCTATACAGTCCCAGATAAGTTCTTCATCAATTGTGGCTCGGATTCCAATGTCACAGACAGCAGCAGTGGTCGAATTTTCATTGGAGAAAGAGAAGGAGAAATGGAATCATCATCTTCTGTTCTTCCTTTCATCTTCCCAAAACATGGTAGCAGCAAAGAGAAAGAGAACAACCATTCACCAACACCAACACCAACACCTCCTCTGTATCAAACTGCAAGGCTTTTCCATGCTGAATCTGAATACAAGTTCAGAATTGAAAACCATGGATATCATCTTCTGCGCCTCCATTTCTTTGCTTTTGAAGGTAACCTCTCCTCTGCTCACTTCAATGTCTCTGTTCCTGGGTTCTGCCTTTTGAACAATTTCACTCCTCAAAACAACAACAAACCCTTAATAGAGGAGTTCTTTTTAATCATCAACACCAACAACTTCCAAATCACTTTCTCACCAATTCCACCAAATCTTGCATTTATAAATGCCATAGAACTCTTCCTTCTCCCCAATACTTTCATCCCAAAAGTCAGAAAATTTTATGACTACAACCGCACAGGACCTGGCCAGAATTCTCCACATAAATATGCTTATCTGAATGGCCTGGAACTAATGGAAATCGTTGAGAAAACAAGTTCAAGTCCTATGGTGAAAGAAGAACAACAGAGTCATCATTCTCATTCTCATTCTCATTGGCATTGCCCTTGGCATATGTGTGGGAATTTGAAACTGTTGGCAATTGTCGGAGCCGTGGCTTTGGTTTCAGTTATAGCAGTTGTGTTGTTCCTTGTGTGTCTGAAACTCAAGAAGATGAAGCACGATGAAAGTGTTAACTGGTTGCCAATGGAGAAAAAAGGAGGAGGAAGCTCACATTCTCATACCAGATATGGTAGCAGCCATGGCTCATCATCATCATCATATTCACATGTACCAAACTTAAACAAGATCAGTTTTGATGAACTCCAAGTTGCTACCAACAACTTCGACCAGAATTGGGTGATTGGAAAGGGTAATTTTGGAACTGTATACAAAGGTCTTCTCAACAATGGAATGAGGGTGGCAGTGAAAAGATTACTTCAACAGCAAGGCCTCTTGGATATGGAAGAAGAGATCAAGATTCTGTTGAGAATTCGCCATCGACACCTCGTTTCGTTGATGGGGTATTGCTATGAGAGACCAGAGATGATACTTGTTTATGAGTACATGGAGAAAGGGACACTGAAGGATCATATATACAATTCCAACTTGTGTTGGATTCAGAGGCTTGAGATTTGCATTGGAGCTGCAAGGGGACTCAATTACCTTCACAATGGATCTTCTTGCAGAGGAATCAACAATGTTCATAGCCATGTAAAGTCTAGTAACATATTATTAGATGAGAATAATATGGCTAAGATATCAGGCTTTGGACTTTCAAGAAAATTAGGGGGTTCTGATGAGAAGAAGATGAGGTGTGATGATGTGTATTCGTTGGGTGTGGTACTTGTTGAGGTGGTGTGTGGAAGGGTGGGTGAATGGGGAAGCATTTGGAAGAAGAAAGGGAGATTGGAAGAAATAGTGGATCCTTGCATCAAGGGTGAAATTGATGGAAAGTCTCTGACAAAGTTTGGTGAGACTGTGGATAAGTGTTTGAGAAAGAAGGGTTTGGAGAGGCCTTGTATGAGTGATGTGTTGTGGGACTTGGAGTATGCTTTGCAGCTTCAGAGAGGGGCAATTCAGACAATAACACACTCACATGGCAATGATAATGCTGCTGCTATTAAAAACACTACTCAAGAAATGGCGATTCTCAAGCATGATCAACTGAATAGTGCAGTGAACTATTATTCTTAA 1893 0.4078 MENFQHHKLHALFLLLLQFHSLAYTVPDKFFINCGSDSNVTDSSSGRIFIGEREGEMESSSSVLPFIFPKHGSSKEKENNHSPTPTPTPPLYQTARLFHAESEYKFRIENHGYHLLRLHFFAFEGNLSSAHFNVSVPGFCLLNNFTPQNNNKPLIEEFFLIINTNNFQITFSPIPPNLAFINAIELFLLPNTFIPKVRKFYDYNRTGPGQNSPHKYAYLNGLELMEIVEKTSSSPMVKEEQQSHHSHSHSHWHCPWHMCGNLKLLAIVGAVALVSVIAVVLFLVCLKLKKMKHDESVNWLPMEKKGGGSSHSHTRYGSSHGSSSSSYSHVPNLNKISFDELQVATNNFDQNWVIGKGNFGTVYKGLLNNGMRVAVKRLLQQQGLLDMEEEIKILLRIRHRHLVSLMGYCYERPEMILVYEYMEKGTLKDHIYNSNLCWIQRLEICIGAARGLNYLHNGSSCRGINNVHSHVKSSNILLDENNMAKISGFGLSRKLGGSDEKKMRCDDVYSLGVVLVEVVCGRVGEWGSIWKKKGRLEEIVDPCIKGEIDGKSLTKFGETVDKCLRKKGLERPCMSDVLWDLEYALQLQRGAIQTITHSHGNDNAAAIKNTTQEMAILKHDQLNSAVNYYS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272128g00012 630 FunFam receptor-like protein kinase FERONIA 310 421 - -
Stsc272128g00012 630 PANTHER OS07G0166700 PROTEIN 334 588 IPR045272 GO:0004714|GO:0006468
Stsc272128g00012 630 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Stsc272128g00012 630 Gene3D Transferase(Phosphotransferase) domain 1 504 592 - -
Stsc272128g00012 630 MobiDBLite consensus disorder prediction 302 326 - -
Stsc272128g00012 630 ProSiteProfiles Protein kinase domain profile. 348 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc272128g00012 630 Gene3D Transferase(Phosphotransferase) domain 1 422 503 - -
Stsc272128g00012 630 Pfam Malectin-like domain 32 194 IPR024788 -
Stsc272128g00012 630 Gene3D - 29 188 - -
Stsc272128g00012 630 Pfam Protein tyrosine and serine/threonine kinase 353 501 IPR001245 GO:0004672|GO:0006468
Stsc272128g00012 630 SUPERFAMILY Protein kinase-like (PK-like) 316 581 IPR011009 -
Stsc272128g00012 630 Gene3D Phosphorylase Kinase; domain 1 309 421 - -
Stsc272128g00012 630 MobiDBLite consensus disorder prediction 311 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272128g00012 Stsc-Chr272128 55000 57388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272128g00012 265 593 Receptor kinase-like Gene Family AT3G46290 45.187 1.17e-86 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc272128g00012 PK_Tyr_Ser-Thr 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272128g00012 - - aip:107642740 587.415