Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272128g00010 ATGGTAGAACTTTCGTATTATAACACACTTATTCTTCTCTTCATTGTTTTCATCACTTTTTACAAGCTATTCACCAAGAGGCACAAAAACCTACCACCATCTCCACCGTCTCTTCCGTTAATCGGTAACCTCCACCAATTAAAACCCCCCGTCTTCCGCACCTTCCATGCCTTATCACAAAAATACGGTCCCATTTTCTCCTTCCGATTGGGTTCCCAATTCTCCGTCGTCGTTTCCTCCGCCTCCTTGGCTGAAGAATGTTTCACCAAAAACGACGTCGTCCTCGCGAACCGTTTTCGTTCCCCCAAGACCGAGTACCTAACCTACAACAACACCGTGGTGATAACTTCGCCGTACGGCGACCATTGGCGCAACCTCCGCCGTATCTGCTCCCTGGAGATCCTCTCCACTCACCGCCTCAACTCCTTCACGGGAATCCGAAGGGACGAAAATGCGAGATTGATTCGGAGCTTGAGTCTAGGGTTAGGCGAGGGTTTCACGAGAGTTGAAGTGAGATCGAAGTTGACGGAGCTAACCTTCAACACGATCATGAGAATGGTGTGCGGGAAACGGTATTACGGGGATGAATGTGATGGAACGACTGCGGAGGAAGCGAAGAAGTTCAGGGATGTGATGGATGATATGGCTAAGTTCGGGTTGAGTTCGAATCTTGGGGATTTTGTGCCTCTGGTTCGGTGGTTCGATTTCAGTGGTGACAATAAAAAACTGCAAATGATTGGTGAGAGGATGGATGCTCTGTTCCAAGGTCTCATCGATGAGCATAGGAGCAAGAAGGAAAGTTCAAACACCATGATAGATCACCTTCTCTCCTTTCAGGAATCGCAGCCAGAGTATTACACTGATCAAATCATGAAAGGGCTTATCATGGCTATGATGGTGGCTGGAACAGAGACTTCGGCTATAACAATAGAGTGGGCATTGTCTAATCTGTTAAACAATCCACAAGTGTTGGAGAAAGCAAGGATGGAGTTGGACAATCATATTGGACAAGAGAGGCTCTTAGAGGAAGGGGACCTAAACAAATTAACCTACCTTCATAAAATAATCTCTGAGACTTTGAGATTGAACCCGGCAGCGCCAATGCTGTTGCCACATCTCTCCTCTCAAGACTGCACCCTTGGAGGCTATCATGTGCCACGTAACACTTTGGTTTTTGTGAATGCATGGGCCATCCATCGGGATCCAGAGTTGTGGGCCCAACCTGCAACTTTCAGGCCTGAGAGATTTGAGAACCCTGAAACCAGCAATAGCAACAACCCTTATGCCTTAATGCCCTTTGGGATGGGGAGGAGGGCGTGTCCTGGGTCGGGCCTAGCCCAGAGGACTGTGGGCTTGACTTTGGGCTCTTTGATACAATGCTTTGAGTGGAACCGGATTGGCGACGAAGAAATTGACATGACTGAAGGACATGGAACTCTGATGTCAAAGGCTATTCCGTTGGAGGCCCAATGTAAAGCCCGTCCAATCGTCACCAAGATTTTCTCTCAATGA 1512 0.4802 MVELSYYNTLILLFIVFITFYKLFTKRHKNLPPSPPSLPLIGNLHQLKPPVFRTFHALSQKYGPIFSFRLGSQFSVVVSSASLAEECFTKNDVVLANRFRSPKTEYLTYNNTVVITSPYGDHWRNLRRICSLEILSTHRLNSFTGIRRDENARLIRSLSLGLGEGFTRVEVRSKLTELTFNTIMRMVCGKRYYGDECDGTTAEEAKKFRDVMDDMAKFGLSSNLGDFVPLVRWFDFSGDNKKLQMIGERMDALFQGLIDEHRSKKESSNTMIDHLLSFQESQPEYYTDQIMKGLIMAMMVAGTETSAITIEWALSNLLNNPQVLEKARMELDNHIGQERLLEEGDLNKLTYLHKIISETLRLNPAAPMLLPHLSSQDCTLGGYHVPRNTLVFVNAWAIHRDPELWAQPATFRPERFENPETSNSNNPYALMPFGMGRRACPGSGLAQRTVGLTLGSLIQCFEWNRIGDEEIDMTEGHGTLMSKAIPLEAQCKARPIVTKIFSQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272128g00010 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc272128g00010 503 CDD CYP81 63 487 - -
Stsc272128g00010 503 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 PANTHER CYTOCHROME P450 82C3-RELATED 12 494 - -
Stsc272128g00010 503 FunFam Cytochrome P450 family protein 23 497 - -
Stsc272128g00010 503 Pfam Cytochrome P450 32 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00010 503 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272128g00010 Stsc-Chr272128 50707 52506 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272128g00010 8 503 Cytochrome P450 AT4G37340 54.653 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272128g00010 K13260 - gmx:100804509 662.529