Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272128g00007 ATGTCTGCCTTCCTTCATCTCTCACTCCTCTCTATATTCTTCCTTCTCATTTTCAAGAAGCTCATCTTCAAATCAAGACCATTCAAAAACCTTCCTCCAGGTCCACCATATATTCCCTATATTGGAAACCTCCACCAACTCAAACAACCATTCCACCGAACTTTCTATAACCTCTCACAAAAATATGGCAAAGTCTTCTCCCTAAGGTTCGGTTCCCGCCTCGTGGTTGTCGTTTCATCACAAACGGCAGCGCAAGAATGTTTCTCCAAAAACGACATCGTTCTCGCAAACCGTCCTCACTTTCTCACCGGAAAGTACGTCGCCTACAACAACACCACCCTGGTGCTTTCCCCTTACGGAGACCACTGGCGCAACCTCCGCCGCATCGCAACGCTCGAGGAATGTTCTAACGGCTTTAACAAAGTGGAGCTGAGTTCTAAGTTCTCGGAAATGACGTTCAACACTATCATGAGAATGGTTTCTGGAAAAAGATATTGCGGCGAAGATTGTGACGTGGCCGATGTTGAAAAAGCGAGGGTATTCAGAGTAACAATCAAGGAGCTGATGGCTATGGGAGGAGTTAACAACCCTGGAGATTTCATATCTGTGCTTCGGTGGTTTGATTTGGATGGTTTGGATAGCAAGCTAAAGAAAATTAGAAAAATAACTGATTCTTTTTTACAAGAGCTTGTTGATGAACATCGCAGTGGCAAGGGAAACAAGAATGACACAATGATTGATCATCTTTTGACTCAGCAACAATCGAATCCTGAGTACTATACAGATGGAATCATCAAAGGACTTATTCTGGTTATGCTGCTTGCAGGAACAGACACATCATCTGTGACTTTAGAATGGGCAATGCTTAATTTGTTAAATCATCCAGAAATGATAGAAAGGGCAAGAAAAGAGATAGACACGTTCATTAAACATGATCGTCTCATAGATGAGCCTAATATATCAAAACTCAAGTATCTTCAAAATATAGTGTACGAAACACTGAGATTACACCCTGCAGCACCATTATTGATTCCACATCTTTCTTCAGAAGATTGCACCATAGAAGGATATACGGTGCCGCAAAACACAATTATATTGGTGAATGCTTGGGCTATTCATAGAGATCCCGATGTGTGGGGTGACGACTCTATACAATTTAAACCTGAGAGGTTTGAGAAGGAAGGTGAAGCAAACAAGCTACTTGCATTTGGAATAGGGAGAAGGGCTTGTCCAGGAACAAATTTGGCACAACGCACGTCGGAAGCTAAGCAGCGTAGGAAGATTATCAAGGAGTTGATGGTCTTTGGCAGTAGGGTGTCAAAAATCCTCGTCATTGATGAGCATCGCATTGGCTAG 1356 0.427 MSAFLHLSLLSIFFLLIFKKLIFKSRPFKNLPPGPPYIPYIGNLHQLKQPFHRTFYNLSQKYGKVFSLRFGSRLVVVVSSQTAAQECFSKNDIVLANRPHFLTGKYVAYNNTTLVLSPYGDHWRNLRRIATLEECSNGFNKVELSSKFSEMTFNTIMRMVSGKRYCGEDCDVADVEKARVFRVTIKELMAMGGVNNPGDFISVLRWFDLDGLDSKLKKIRKITDSFLQELVDEHRSGKGNKNDTMIDHLLTQQQSNPEYYTDGIIKGLILVMLLAGTDTSSVTLEWAMLNLLNHPEMIERARKEIDTFIKHDRLIDEPNISKLKYLQNIVYETLRLHPAAPLLIPHLSSEDCTIEGYTVPQNTIILVNAWAIHRDPDVWGDDSIQFKPERFEKEGEANKLLAFGIGRRACPGTNLAQRTSEAKQRRKIIKELMVFGSRVSKILVIDEHRIG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272128g00007 451 SUPERFAMILY Cytochrome P450 32 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PANTHER CYTOCHROME P450 82C3-RELATED 140 420 - -
Stsc272128g00007 451 Pfam Cytochrome P450 138 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 Pfam Cytochrome P450 32 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 Gene3D Cytochrome P450 18 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Stsc272128g00007 451 CDD CYP81 63 419 - -
Stsc272128g00007 451 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00007 451 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272128g00007 Stsc-Chr272128 35437 38914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272128g00007 1 418 Cytochrome P450 AT4G37330 51.339 1.49e-155 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272128g00007 K13260 - gmx:100811727 587.8