Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272128g00004 ATGAGGCTAGTGCAGAAACTGGCTCAGGAATGTTCCAACGGGTTCAAACAAGTGGAGCTCAGATCTAAATTCTCAGAAATGACGTTCAACACTATCATGAGAATGGTTTCTGGAAAAAGATACTATGGTGACGATTGTGATGTCACAGATGTTGAAGAAGCAAGGAAATTCAGAGAATTAATCAAGGAGTTGGTGGCTTTGGCGGGAGCAAACAACCCTGGAGATTTCATATCAGTTCTTCGGTGGTTCGATTTTGATGGTTTGGAGAGCAAGTTAAAGAGGATTAGTAAGAGAACTGATTCTTTTTTACAAGGGCTTATTGATGAACATCGCAGTGGTAAGGGAAAACATGACACCATGATTGATCATCTTTTGACTCAGCAACAGTCGCATCCTGAGTACTATACTGATCAAATCATCAAAGGACTTATTCTGGTTATGCTGCTTGCTGGAACGGATACATCATCAGTTACTTTAGAATGGACAATGTCTAATTTGTTAAACCATCCAAAAATAATAAAAAGAGCAAGAAAAGAAATAGACATGCAGATTGGAGAAGATCGCCTTATAGACGAGCCTGACATATCAAAACTAAATTATATTCAGAACATAGTGTATGAGACATTTCGATTGCATCCTGCCGCACCATTACTGGTTCCGCATCTTTCTTCAGAGGATTGCACCTTAGAGGGATATAAGGTCCCAAAAGACACAATTGTATTGGTGAATGCCTGGGCTATTCATAGAGATCCCAACGTGTGGGGTGATGACTCTATGGAATTTAAACCTGAGAGGTTTGAAAAGGAAGGTGAAGCTAACAAGCTACTTACATTTGGAATAGGGAGAAGGGCTTGTCCAGGAGCGAATTTGGCACAACGCACTGTGAATTTAGTGTTAGGTTTGTTGATTCAGTGTTTTGAATGGGAACGAACAACACATGAAGAAATTGGAATGGATGAAGGAAAAGGACTCACGGTTTCAAGGAAAATTCCCTTAGAAGCAATGTGTAAAGTGCGTGATACATTTACGACTAAGACTATTATTTAA 1047 0.3964 MRLVQKLAQECSNGFKQVELRSKFSEMTFNTIMRMVSGKRYYGDDCDVTDVEEARKFRELIKELVALAGANNPGDFISVLRWFDFDGLESKLKRISKRTDSFLQGLIDEHRSGKGKHDTMIDHLLTQQQSHPEYYTDQIIKGLILVMLLAGTDTSSVTLEWTMSNLLNHPKIIKRARKEIDMQIGEDRLIDEPDISKLNYIQNIVYETFRLHPAAPLLVPHLSSEDCTLEGYKVPKDTIVLVNAWAIHRDPNVWGDDSMEFKPERFEKEGEANKLLTFGIGRRACPGANLAQRTVNLVLGLLIQCFEWERTTHEEIGMDEGKGLTVSRKIPLEAMCKVRDTFTTKTII 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272128g00004 348 Pfam Cytochrome P450 3 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PANTHER CYTOCHROME P450 82C3-RELATED 7 339 - -
Stsc272128g00004 348 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 285 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 27 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 139 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 159 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 243 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS E-class P450 group I signature 275 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 Gene3D Cytochrome P450 1 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 SUPERFAMILY Cytochrome P450 3 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 278 287 IPR017972 GO:0005506|GO:0016705
Stsc272128g00004 348 PRINTS P450 superfamily signature 203 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS P450 superfamily signature 150 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc272128g00004 348 PRINTS P450 superfamily signature 276 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272128g00004 Stsc-Chr272128 27637 33728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272128g00004 2 341 Cytochrome P450 AT4G37370 57.941 1.24e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272128g00004 K13260 - gmx:100811727 538.495