Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272126g00007 ATGTCACATATTAATTATATAAAGAAGACATTTTTCCCTGCAAGTTCAATAAACTACTATGAAGTTGTGAGCTTCTTCTGCCGCATACTGTTCATGTTCTTGTTTGGTTTAGAGATGAACATTCATTACACAGTGAGAAATTGGCGCCTAGTAAGCTTGGTTGCTTGTGGTGGTGGATTAATGGGTGCAATCTTTGGCCTTTCTGTCTCATTTTATTTGTACAATGAGTTACAAACCAATGCACCTATGCAATATTTTTGTATGATCATCATGCTAGTTATCTCATACACAAGCTCTCCTATGGTCATTCGTCTCGCGGCGGAGTTGAGGTTCGGTGCGTCTGACGTCGGCCGGATCGCGGTGTCGGCTGCCGTGATCACAGAAATGGGATGCTTGGTGTTCTTCAATGTAATGGTTAATTTTAATAAAAAGAGATTTTTCCTCAGTTTTGCTTGCCTTTCCGTCACTGGCACTGTTATTGTAATAAACAGGTATTTCTTCTCTTTCCATTTGAATTATATATCAATGGTTACACACACAAAAATTGCTACTGAATTAATATGGAATACTATTAAAATATAA 582 0.378 MSHINYIKKTFFPASSINYYEVVSFFCRILFMFLFGLEMNIHYTVRNWRLVSLVACGGGLMGAIFGLSVSFYLYNELQTNAPMQYFCMIIMLVISYTSSPMVIRLAAELRFGASDVGRIAVSAAVITEMGCLVFFNVMVNFNKKRFFLSFACLSVTGTVIVINRYFFSFHLNYISMVTHTKIATELIWNTIKI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272126g00007 193 Gene3D - 6 189 IPR038770 -
Stsc272126g00007 193 PANTHER CATION/H + ANTIPORTER 5 162 - -
Stsc272126g00007 193 Pfam Sodium/hydrogen exchanger family 21 167 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272126g00007 Stsc-Chr272126 59080 59661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272126g00007 4 169 Antiporter Super Family AT1G16380 26.316 8.37e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272126g00007 K26731 - gmx:100804522 255.373