Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272125g00005 ATGACTTTCCAAGACCAAGAACTGCTTCACTTCATGCTCACCGAAGCCGAAATAGACGACCTCTTTTCCCTCATTAACCACCATCCGGCCAGCCCTAGCTCCGGCTCGCAGGGGTCGAACCGGGCGGTTTACTCCAGCGAGGAGAGAAAGCTGAGGCGCATGCAGTCAAACCGGGAATCGGCCCGAAGATCCCGCGGCAGAAAGAAGAAGCACTTGGAGAATCTGACGGTCCAATTGAACCGGTTGAGACTCCAAAATCGAGAACTCAAGAACCGGCTAGTGGTGACCATGCACCAACATCTCCTAATCTCCCTCGAGAATGAACAATATGCCACCATGCAAACCAAAACCCTAATCATCTTTCTTCCTTTCTTCCTCCCTCCATCGACGCCGCCATCGTGCCCCCACCACTCAGCCACTGGATCTTCTTCTTCTTCACATCGTGCCACCATCGCCATTCACATCGCTCCCGGTGCCAACCTTGACGCCGCGACGAGATGA 501 0.5409 MTFQDQELLHFMLTEAEIDDLFSLINHHPASPSSGSQGSNRAVYSSEERKLRRMQSNRESARRSRGRKKKHLENLTVQLNRLRLQNRELKNRLVVTMHQHLLISLENEQYATMQTKTLIIFLPFFLPPSTPPSCPHHSATGSSSSSHRATIAIHIAPGANLDAATR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272125g00005 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 52 67 IPR004827 GO:0003700|GO:0006355
Stsc272125g00005 166 MobiDBLite consensus disorder prediction 45 61 - -
Stsc272125g00005 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 47 93 IPR004827 GO:0003700|GO:0006355
Stsc272125g00005 166 Coils Coil 72 99 - -
Stsc272125g00005 166 SMART brlzneu 45 109 IPR004827 GO:0003700|GO:0006355
Stsc272125g00005 166 MobiDBLite consensus disorder prediction 29 70 - -
Stsc272125g00005 166 FunFam BZIP transcription factor 47 98 - -
Stsc272125g00005 166 Gene3D - 47 99 - -
Stsc272125g00005 166 SUPERFAMILY Leucine zipper domain 49 100 IPR046347 GO:0003700|GO:0006355
Stsc272125g00005 166 Coils Coil 44 64 - -
Stsc272125g00005 166 MobiDBLite consensus disorder prediction 29 44 - -
Stsc272125g00005 166 CDD bZIP_plant_GBF1 50 100 IPR045314 GO:0003700|GO:0006355
Stsc272125g00005 166 Pfam bZIP transcription factor 48 93 IPR004827 GO:0003700|GO:0006355
Stsc272125g00005 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 32 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272125g00005 Stsc-Chr272125 21093 27090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272125g00005 46 114 bZIP Transcription Factor Family AT4G37730 52.174 1.78e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc272125g00005 bZIP_1 2.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272125g00005 - - cam:101509317 137.887