Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272122g00007 ATGTTATTGGGCTTGCTGGAAGGAATCCCAACAATGTTGAAGGGAGAAGTGGCAATGTTCAAGATGAAGCCTCAGATGCACTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATAATTTTCCAAAGGAGGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGTTATTAATGAAGGGCAGGGTTGGGAATCTCCTCGAGAACCTTATGAAGTGAAGGCTTGGATTTTAGCAAAGACAGCTGCAGGGAAATTGATTATGTCACATACTAAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGTAG 327 0.3976 MLLGLLEGIPTMLKGEVAMFKMKPQMHYGEDDCPISAPDNFPKEDELHFEIELIEFFKAKVINEGQGWESPREPYEVKAWILAKTAAGKLIMSHTKGEPYFFTFGKSE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272122g00007 108 Gene3D - 1 60 IPR046357 GO:0003755
Stsc272122g00007 108 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 60 - -
Stsc272122g00007 108 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 3 54 IPR001179 GO:0003755
Stsc272122g00007 108 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 57 IPR001179 GO:0003755
Stsc272122g00007 108 SUPERFAMILY FKBP-like 3 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272122g00007 Stsc-Chr272122 41551 42832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272122g00007 8 91 Calmodulin-binding Proteins AT5G48570 33.684 1.20e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272122g00007 - - adu:107482083 204.912