Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272122g00001 ATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAACGCCTATGTACTCTGCCGGTTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCGAACTGTGATGAGGTCGAGCAAACAGATTCGGTTCCCATGGCGGCCAATTACTCCCCCGAAGAAATACAGTCTGATCAGGCTCTGGCTGAAGTATCGCCGTCTCAGGTCACGGATGATAAGCACCAGGGAGTTATCCCTGAGCTCTCTGAGGAAGCGGTTTCCAACGTTATTACCTCTGCTGATTGCCATAGTGATGGATACGATGCTTGTGAAACGCGAAATCAAGCTTTAGAACTACCTGCTGAGGACATTCCACCGATAAATTGGGACATATTCAATGACCCTGAAGACAAGATATTTGATGACAAATTATTCTCCCCAATCCACAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAACGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAGACACAGAACAACTTCTTTAACGATGTTAAACAAAGCATATCAGGTAGCGAACCTGATGCGGGGGTCACCAATATGACATGCATACACCCAATGAATGTTTTATATCCAGACGAGGCAATTCACAGAAAGGTTGCTATGGCAACAACTCCACAGTATTGCAGCACCTTCACATCTGACTTCAGCGCTGATGAGCAGAAGAGCAATGTTGCGTTAATTCAAAACAATTCCCAGATGGCTTCTTTCTCTGATCCCAGAACAGGCCAAGTGTATAACGTATTCAATGATTACGAACTGCCAAGAAACCTCAATACCTTTGCTAGTGGTGATACTGGAATCAAGTTAAGGACCCGGCAAGTTCGAAATGAACAACCAGCAATGAACTTTCCCAATCAAGGTAATGCAGATAGGAGAATCCGACTGGAAAAGCGTTCTCTAAATGTCTTAAACAAGATGAAAGATGTCCGGGGTCCTGAACAAGAGCATGATTCAAAACCAATCACTGCAGGGGAGAACAAGAACAAGACTTCTAAAACTCATACTGCAGATGAGAGTGCTACTACTAATGATGAAAACGAATTCCAGGAGAAAACTGAGTCAACTGATAAGAAAAACCTGATAACTAAACAATTTGGAAAGGGAGGTTCTTCCATGTTGGGGTTGAAGGGATTATTGCGCAGAAGGCTCAGTTACATATCAAAGGCTTCCTCCAATTTCAAAATGTGGTCTTGTGTTGTTGTGGCTTCTGCCTTTGTATTGGTCTCGTTTGTGTTCCTTGCTAACATATGGGGATATATTAACATATGA 1353 0.4324 MHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSVPMAANYSPEEIQSDQALAEVSPSQVTDDKHQGVIPELSEEAVSNVITSADCHSDGYDACETRNQALELPAEDIPPINWDIFNDPEDKIFDDKLFSPIHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQTQNNFFNDVKQSISGSEPDAGVTNMTCIHPMNVLYPDEAIHRKVAMATTPQYCSTFTSDFSADEQKSNVALIQNNSQMASFSDPRTGQVYNVFNDYELPRNLNTFASGDTGIKLRTRQVRNEQPAMNFPNQGNADRRIRLEKRSLNVLNKMKDVRGPEQEHDSKPITAGENKNKTSKTHTADESATTNDENEFQEKTESTDKKNLITKQFGKGGSSMLGLKGLLRRRLSYISKASSNFKMWSCVVVASAFVLVSFVFLANIWGYINI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272122g00001 450 MobiDBLite consensus disorder prediction 358 383 - -
Stsc272122g00001 450 ProSiteProfiles NAC domain profile. 1 29 IPR003441 GO:0003677|GO:0006355
Stsc272122g00001 450 MobiDBLite consensus disorder prediction 333 383 - -
Stsc272122g00001 450 MobiDBLite consensus disorder prediction 333 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272122g00001 Stsc-Chr272122 1 2359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272122g00001 1 337 NAC Transcription Factor Family AT4G35580 26.211 3.68e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272122g00001 - - gmx:100777071 405.216