Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272116g00002 ATGAAGATCACATTTTTTCTAGTAGCTTGCTGTTTGGTGCTTTTGGGTCTCATTGGGGATTGTAATGGTGGCAGCTTAGTGAAGAACTTCTACAGAAATTCATGCCCTCAAGCTGAGAACATTGTTAACACCAAAATCAACCAATATGTCTCTACAAGACCTGAGTTACCTGCCAAGTTGCTTAGGATGCATTTTCATGATTGCTTTGTCAGGGGTTGTGACGGGTCAGTTTTGTTGAACTCTACTGATACTAATACTGCAGAGAAAGATGCAATCCCTAATTTATCATTGGCTGGTTTTGATGTAATTGATGACATAAAATCTGCACTTGAAGAAAAATGTCCCAAAACAGTTTCATGTGCTGATATATTGGCATTAGCAACTAGAGATGCTGTTTCATTTCAATTTGATAAGCCTATGTGGGAAGTTCTAACTGGTAGAAGAGATGGCACGATATCCAAAAGTAGTGAAGTATTGGACAATATTCCATCACCTTTCTCCAACTTAACCATTCTCAAACAAAACTTTGCCAATAAAGGTCTCACATTGCATGACCTCGTTGTATTATCAGGAGCACACACAGTTGGAGTGACACATTGCAACTTATTCAGTGAAAGGCTTTATAACTTCACTGGAAAAGGTGATCAAGATCCTTCATTGGACCCTACTTATGCTGAATTCTTGAAGACCAAATGCCAGAGCCTGGATGATGACACCACAGAAGTGGAAATGGATCCTAATAGCTCCACCAATTTTGATAGTAACTATTATCCAAACCTTCTTCAGAACAAGGGTATCTTCACTTCAGATTCTGCACTTCTAACAACTAGCCAATCAGCAGATATTGTTAAAGAACTTGTTGATCAACAAAAGTTCTTCACTGAGTTTGCACAATCCATGCAAAAAATGGGAGCTATTCAGGTCCTTTCAGGCTCAGGTGGGGAGATTAGGATCAACTGTTCACTTGTCAACTCATAA 978 0.3906 MKITFFLVACCLVLLGLIGDCNGGSLVKNFYRNSCPQAENIVNTKINQYVSTRPELPAKLLRMHFHDCFVRGCDGSVLLNSTDTNTAEKDAIPNLSLAGFDVIDDIKSALEEKCPKTVSCADILALATRDAVSFQFDKPMWEVLTGRRDGTISKSSEVLDNIPSPFSNLTILKQNFANKGLTLHDLVVLSGAHTVGVTHCNLFSERLYNFTGKGDQDPSLDPTYAEFLKTKCQSLDDDTTEVEMDPNSSTNFDSNYYPNLLQNKGIFTSDSALLTTSQSADIVKELVDQQKFFTEFAQSMQKMGAIQVLSGSGGEIRINCSLVNS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272116g00002 325 FunFam Peroxidase 29 174 - -
Stsc272116g00002 325 PANTHER PEROXIDASE 25-RELATED 12 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 ProSiteProfiles Plant heme peroxidase family profile. 25 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 Gene3D Peroxidase, domain 2 163 303 - -
Stsc272116g00002 325 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Stsc272116g00002 325 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc272116g00002 325 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Stsc272116g00002 325 Gene3D - 29 324 - -
Stsc272116g00002 325 FunFam Peroxidase 163 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272116g00002 Stsc-Chr272116 2902 4400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272116g00002 1 325 Peroxidase AT1G05260 54.878 9.62e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272116g00002 K00430 - gmx:100799691 511.531