Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272112g00003 ATGAGAGTGGCAGCGCACGCACAGTTAGCGATGATGATAGAAAGTTCCACCTCCAAAAATTCCACCATGGAACTCAAATGGCTCAGAACTACAACTACACCAACAACAAAATCAACCACCAACAAGAACCTTCTCAGGCCCCCCATCTTCCCAATTTACATCTCCACCGATCCCCGCCACGCCGACCCTCTCCGACTCAGTGACCTCTGCGCCACGTGCCACTACTCTTTCCACAGGCTCCCGTGCCACGTGGCAAAGGATCAGCCCCTCCTCCTCGATACTGGCAAGCTCCGCATTGCTCTCTCTCACAGCGCCGTCGTTGTCTCCGTCTTCTGCAAGTCTCAACACGTTCTTTCCGCTGCTGATGGTGGTGACGATGAAGGTTTCGGGGTGGTGGATTTGGTTGAGAGTGTGACTCCGGTGACTCCTTTGGACGGTGAATTGGTGGGGTTTGGGCGTGCTGTTTCCGACTGCGGCCTCACTGCTTCAATTTATGATGTCATGGTTGTTCCATCCCTGCGGAGAATGGGAATTGGAAGGATGATAGTTAAAAAGATTGTGAGAATGCTTACAAATAGAGAGGTTTATGACATAGCAGCCCTTTGCACAGAGAATGAGAGGTTGTTTTTTAAGGCGTGTGGATTTGGGGGTGACATTTTAGGGTCTACGACCATGATGTACACCAGAACTGGTTCATCAACTTCCGTGGAAGAACAGACTTTAACACGTGCAGGTCGAAAGCTATTGTTGATTCCCCCTCTTCAAGAACAACATGAACAGTGA 783 0.5006 MRVAAHAQLAMMIESSTSKNSTMELKWLRTTTTPTTKSTTNKNLLRPPIFPIYISTDPRHADPLRLSDLCATCHYSFHRLPCHVAKDQPLLLDTGKLRIALSHSAVVVSVFCKSQHVLSAADGGDDEGFGVVDLVESVTPVTPLDGELVGFGRAVSDCGLTASIYDVMVVPSLRRMGIGRMIVKKIVRMLTNREVYDIAALCTENERLFFKACGFGGDILGSTTMMYTRTGSSTSVEEQTLTRAGRKLLLIPPLQEQHEQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272112g00003 260 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 95 242 IPR000182 GO:0016747
Stsc272112g00003 260 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 53 226 IPR039143 GO:0004343|GO:0006048
Stsc272112g00003 260 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 144 215 IPR016181 -
Stsc272112g00003 260 CDD NAT_SF 145 195 - -
Stsc272112g00003 260 Pfam Acetyltransferase (GNAT) family 142 215 IPR000182 GO:0016747
Stsc272112g00003 260 Gene3D - 51 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272112g00003 Stsc-Chr272112 9222 11206 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc272112g00003 Acetyltransf_1 2.2e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272112g00003 - - lang:109338220 270.011