Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272111g00005 ATGCAAGGGGTGATAGAGAGGTACATGAAGTTCACCGGGGCGGCTCAGCCTGAAGAACCACCTACTACTGAACCACAGCATCATCCTCTGGATGCGAAAGAGGAAGCGGATGTGCTAAAACAGGAAATTGAAACATTGCAAAAGGGCATCAGTTATTTGTTTGGAGGAGGAATTGGGACAATGACAATGGATGATTTACATGTCTTAGAGAAGAATCTTGAGACTTGGATTTATCATATTCGCTCAATGAAGATGAATCTCATGTTACAAGAAATTCAAGATCTGAGAGACAAGGAGGGTACACTCAAAGCAGCAAACAAGTTTCTCCATGATAAGATTTTGGAGAATACAACTGCATTTACTAACTTTGCTCCATTTGCTACTGACTCAACTTACCCACTAACTATACAAGATGGGATTTTTCCAGCTCTAGGAAATGTACTTGGCTAA 450 0.4089 MQGVIERYMKFTGAAQPEEPPTTEPQHHPLDAKEEADVLKQEIETLQKGISYLFGGGIGTMTMDDLHVLEKNLETWIYHIRSMKMNLMLQEIQDLRDKEGTLKAANKFLHDKILENTTAFTNFAPFATDSTYPLTIQDGIFPALGNVLG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272111g00005 149 Pfam K-box region 24 113 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc272111g00005 149 ProSiteProfiles K-box domain profile. 29 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272111g00005 Stsc-Chr272111 44348 48655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272111g00005 1 141 MADS-box Gene Family AT1G71692 53.061 2.68e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272111g00005 - - gmx:100783345 191.815