Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272104g00008 ATGAAGCGGGCAAGGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTTTATCCGACGATTGCCCTTCAAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAAGTACTAATGAACATATGGACCTACCTCCTGGGTTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTTTCGCATCTTTCCAATTAAATGGCAACGCCCTCCTCTGTTTACTTTCAGAGATAATTGGCAAGTTGCTGCAGGTGAAGAAAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTGCCATACCTCCTAGCCCTTCTGTTTCTCGTGATGTAGAGAAGGAAGGTTATGATGATAACCTCACTCCTCTCATCCCTATCATTCCCATCGAGGAGGAAGATTCAATGGATATTAATCCTGAAGTGGCAGTCACAAAACCTGCAGATACCCCCACTAAATTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTACGACACCCATTAATTCACAATGCAACACCTCAGCTACTGTTGCCTTATCTGCGAGTGGAAACTCAATGTCGGCGATTTCTCCTGGTTCGGAGCCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCTTCAGCCATTATGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTGCTTGTTAAAATATTTAATGACCCAAAAATGATTGAGAAATTGGTTAACCAACGCGGAACTGCAGCTGCCCCCATAACTACCTCTTCAAATACTGGGTTGAAAACTGCTGCTTTTGGGACTACACCGACAAGCGCAGTTGATTTAGTACCTCCTGTTCCAAAGCAAGCAACTTCCTCAGTCTCCATGTTGATGCCTGCATCTAATAAGCCAGCAATTCCCCCAGTTCCATTGTCTAGGCCTTCCTCTGGTAATTTAGCTACTAGCTCAGTTACACTGCCTCCACAAGCAACTACACCATCACCTCCACCTCCACTTCCATCCACTTCTACATTTAATATGCACAGGCCTGTCAACAATAATGCTCACATTGTTACGGATGTAATGCTTCCCACTTTAGAACCCCAGCCTCCTCAACAAGATAGAATTCTGTCGTCTGGTATAAAGCGCACGGCACCATTGCCTTGTGTGAATTCATCCAGTGAATTGAGCACAGTGCCTTTGAAGTCAACTGCTATGAATTTGCATGCAGGTGCAAACCAGGTGCGATCAAAGGCTGCATCAGTGCCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCAACTATTATAAGAACCTTATTAGGCAACATGGCGCAGATAAGCAAGATGGTCAGGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTGAAAACGGTAAATAACCTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGGTGCCGAAATGGTGCAAATTGCCCCTATCAGCACGATATCTCTGCTCAGTGGGGAGCTGGTAATGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1671 0.4321 MKRARKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSSTNEHMDLPPGFEDNHFLNQPKVELFRIFPIKWQRPPLFTFRDNWQVAAGEESKEKMDQKLREMKVLEAVYPRISAIPPSPSVSRDVEKEGYDDNLTPLIPIIPIEEEDSMDINPEVAVTKPADTPTKLLSQNLQQYIAATTPINSQCNTSATVALSASGNSMSAISPGSEPDLAAASALVASAIMKSNEQGNPIDMDLLVKIFNDPKMIEKLVNQRGTAAAPITTSSNTGLKTAAFGTTPTSAVDLVPPVPKQATSSVSMLMPASNKPAIPPVPLSRPSSGNLATSSVTLPPQATTPSPPPPLPSTSTFNMHRPVNNNAHIVTDVMLPTLEPQPPQQDRILSSGIKRTAPLPCVNSSSELSTVPLKSTAMNLHAGANQVRSKAASVPYQTSSTGSSFAVKDANYYKNLIRQHGADKQDGQESLIGIRHNNFQDLKTVNNLKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWGAGNDLVAQNAKRMKLGTEVNGRI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272104g00008 556 MobiDBLite consensus disorder prediction 332 346 - -
Stsc272104g00008 556 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 549 - -
Stsc272104g00008 556 ProSiteProfiles Zinc finger C3H1-type profile. 501 529 IPR000571 GO:0046872
Stsc272104g00008 556 MobiDBLite consensus disorder prediction 323 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272104g00008 Stsc-Chr272104 48966 53761 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Stsc272104g00008 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272104g00008 - - adu:107488052 927.932