Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272104g00002 ATGGCAAACAGAAAGTCCAATAAGGTTGCACAAGCAGTAGTTCTGAAGCAGATTCTTAAGAGGTGTTCAAGTTTTGGAAAGAAGCAAAGCTGCAATAATAATGAAGAGGGTCTCCCTGATGATGTACCAAAAGGTCATTTTGTTGTGTATGTTGGCGAGAACAGGAGCAGGTACATTGTTCCAATATCATGGCTTGATCATCCACGCTTTCAAATTCTGCTCCAAAGGGCTGAAGAGGAGTTTGGTTTCAACCATGTCATGGGACTCACCATTCCTTGTGATGAAGTTGCTTTTGAATCTTTATCCTCAATCATCAGATATTAG 324 0.4074 MANRKSNKVAQAVVLKQILKRCSSFGKKQSCNNNEEGLPDDVPKGHFVVYVGENRSRYIVPISWLDHPRFQILLQRAEEEFGFNHVMGLTIPCDEVAFESLSSIIRY 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272104g00002 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 101 IPR003676 GO:0009733
Stsc272104g00002 107 Pfam Auxin responsive protein 16 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272104g00002 Stsc-Chr272104 8904 9227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272104g00002 5 105 Calmodulin-binding Proteins AT4G34750 45.545 1.49e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272104g00002 K14488 - gmx:100798840 180.259