Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272100g00002 ATGGCGAAGGAACAGTTGCAGGTGCTGAACGCACTTGATGTTGCAAAGACACAATGGTACCACTTCACCGCCATTGTCATAGCAGGGATGGGTTTCTTCACCGATGCATATGACCTCTTCTGCATCTCCCTCGTAACCAAGCTCCTTGGCCGCTTGTACTACTACGACGGCTCCGACAAGCCCGGTTCTCTTCCCTCCAACGTCGCCTCTGCCATCAACGGTGTTGCTTTCTCCGGCACCCTCGCTGGCCAACTATTCTTCGGTTGGCTGGGTGACAAAATGGGAAGGAAGCGTGTCTACGGAATGACACTCATGCTCATGGTTATTTGCTCCCTCGCCTCCGGACTCTCCTTCGGAAAAGAGCCTAAATCTGTTATGGCCACTCTTTGCTTCTTTAGGTTTTGGCTTGGGTTTGGGATCGGCGGCGACTACCCTCTCTCTGCAACCATTATGTCGGAGTACGCCAACAAGAAGACACGTGGCGCATTCATCGCTGCGGTCTTTGCCATGCAAGGCTTTGGAATCCTTGCGGGTGGCATGATTGCCATCATAGTTTCCTCCATATTCAAGGGACTGCACCCTGCTCCGGCCTTTGAGTTCGACCACGTGGGGTCCACTGTGCCACAAGCCGATTACGTTTGGAGGTTAATCTTGATGTTTGGCGCACTTCCCGCTCTCGCCACGTACTACTGGAGGATGAAGATGCCGGAGACGGCAAGGTACACCGCGTTGGTGGCGAAGAACGCAAAGCAAGCAGCTTCAGACATGTCCAAGGTTCTTGAGGTCGAGATTGAAGCAGAGCAGGAGAAGATAGAGCAGCAAGAAGCTGCAGCAGGGAATGACTTTGGATTGTTCTCGAAAGAGTTTGTTAGGCGTCACGGGCTTCACCTTGTTGGAACCGCCACAACTTGGTTTCTTCTGGATATTGCATACTACAGCCAGAATCTGTTCCAGAAAGATATCTTCACTGCAATCGGTTGGATCCCGCCGGCGAAGACGATGAACGCCATCGAAGAGGTTTACAAGATAGCCAGAGCACAGACACTAATTGCACTGTGCAGCACTGTTCCTGGTTACTGGTTCACCGTGGGACTCATTGATAGGATTGGAAGGTTTTCAATTCAGTTGATGGGATTCTTCTTCATGACGGTGTTCATGTTTGCATTGGCCATACCTTATCATCACTGGACCTTGAAGGGCAACCAGATTGGCTTTGTTGCCATGTACTCGTTAACGTTCTTCTTCGCCAACTTTGGACCCAATGCCACCACTTTTGTGGTCCCTGCCGAGATCTTCCCTGCCAGGCTGAGATCAACGTGTCATGGCATTTCAGCAGCTGCAGGGAAAGCTGGAGCAATGGTTGGTGCTTTTGGATTTGTTTATGCTGAGAAGGGAATTGGAGTGAGGAACACGCTTATAATCCTGGGTGTGGTTAACCTCTGTGGCTTCTTATTCACATTCTTGGTGCCTGAATCTAAAGGAAAATCACTTGAAGAAATGTCCGGTGAAGCTGAGGTACAACAAAATGAGGATAATAGTGTTGTTTAA 1548 0.5006 MAKEQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYYDGSDKPGSLPSNVASAINGVAFSGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSLASGLSFGKEPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMIAIIVSSIFKGLHPAPAFEFDHVGSTVPQADYVWRLILMFGALPALATYYWRMKMPETARYTALVAKNAKQAASDMSKVLEVEIEAEQEKIEQQEAAAGNDFGLFSKEFVRRHGLHLVGTATTWFLLDIAYYSQNLFQKDIFTAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVGLIDRIGRFSIQLMGFFFMTVFMFALAIPYHHWTLKGNQIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFVYAEKGIGVRNTLIILGVVNLCGFLFTFLVPESKGKSLEEMSGEAEVQQNEDNSVV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272100g00002 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857
Stsc272100g00002 515 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
Stsc272100g00002 515 Gene3D MFS general substrate transporter like domains 269 515 IPR036259 -
Stsc272100g00002 515 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Stsc272100g00002 515 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc272100g00002 515 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 497 - -
Stsc272100g00002 515 CDD MFS_PhT 25 493 - -
Stsc272100g00002 515 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Stsc272100g00002 515 Pfam Sugar (and other) transporter 25 501 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc272100g00002 515 Coils Coil 250 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272100g00002 Stsc-Chr272100 12917 16273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272100g00002 1 502 Inorganic Solute Cotransporters AT2G38940 79.457 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272100g00002 K08176 - gmx:100792711 892.878