Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272100g00001 ATGTCAGGACAACAGTTAGGAGTGCTCAATGCACTCGATGTTGCAAAGACACAATGGTACCATTTCACAGCAATTGTGATTGCTGGCATGGGATTCTTCACTGATGCTTATGATCTCTTCTGCATCTCCCTTGTCACCAAGTTGCTTGGGAGGATATACTACACAGATATAAGAGACCCAAAGCCTGGTGTTCTACCTCCAAATGTGCAAGCTGCTGTGACAGGTGTCGCGCTATGCGGTACTCTAGCAGGCCAGCTTTTCTTTGGTTGGCTTGGTGACAAGATGGGAAGGAAGAAGGTCTATGGACTAACCCTCATGCTCATGGTGGTTTGTTCCATTGCCTCTGGCCTCTCTTTTGGATCCAGTGCAAAGGGTGTTATTGCAACCCTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTTTCAGCTACAATCATGTCTGAGTATGCCAATAAGAAGACAAGAGGGGCCTTCATTGCTGCAGTGTTTGCTATGCAAGGATTTGGGATCCTTGCTGGTGGAATTGTGGCCTTGATTGTCTCATCTGCATTTGACCATCACTACAAGGTCCCTACTTATAAAGAAAATCCACAAGCATCATTGGTGCTGCCTGCATTTGATTATGTTTGGCGCATCATCTTGATGTTTGGTGCTGTGCCGGCTGCTCTGACTTACTACTGGCGTATGAAGATGCCTGAGACGGCTCGTTATACAGCTCTTGTTGCAAAGAATGCCAAACAAGCCGCCTCGGACATGTCCAAGGTGCTACAAGTTGAGCTTGAAGCTGAGGAGGAGAAGGTGAGAGAAATCACAGAGAATCAAAACCAAAAGTTTGGCTTGTTCAGCAAGGAATTCGCCAAGCGCCACGGCTTGCACTTGTTGGGAACCACAACTACTTGGTTCTTGTTGGACATTGCTTTCTACAGTCAGAATCTTTTCCAGAAGGACATTTTCAGTGCCATTGGATGGATTCCCCCTTCCCAAGAAATGAATGCCATCCATGAGGTTTATAGAATTGCAAGAGCACAAACACTCATTGCATTATGCAGTACTGTGCCAGGATACTGGTTTACAGTGGCCTTCATCGATCACATGGGACGTTTCGCCATCCAATTGATGGGTTTCATCTTCATGACAATCTTCATGTTCGCACTCGCCATACCATATGATCACTGGACTAAGAAAGAGAACAGAATTGGGTTTGTGGTGATGTACTCTCTGACCTTCTTCTTTTCAAACTTTGGTCCCAATGCAACCACATTTGTTGTCCCAGCCGAGATTTTCCCAGCAAGGTTGAGGTCTACTTGTCATGGAATCTCAGCTGCTGCTGGTAAAGCTGGAGCCATTGTTGGTGCATTCGGCTTCTTGTATGCTTCACAAAGCAAGGACCCCAAGAAGACTGATAAGGGCTACCCAACTGGTATCGGTGTGAAGAACTCCCTCATCATGCTTGGTGTCATCAACTTCTTGGGAATTATCTTCACCTTGTTGGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTANNNNNNNNNNCAGTGAGGCTATTGAGATGCAAGGGTCTGCTAGGACTGTTCCAGTTTAA 1608 0.459 MSGQQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDIRDPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLMLMVVCSIASGLSFGSSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHYKVPTYKENPQASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVREITENQNQKFGLFSKEFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDHMGRFAIQLMGFIFMTIFMFALAIPYDHWTKKENRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYASQSKDPKKTDKGYPTGIGVKNSLIMLGVINFLGIIFTLLVPESKGKSLEELSXXXXSEAIEMQGSARTVPV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272100g00001 535 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 512 - -
Stsc272100g00001 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Stsc272100g00001 535 Pfam Sugar (and other) transporter 25 516 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc272100g00001 535 NCBIfam phosphate:H+ symporter 11 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc272100g00001 535 FunFam Inorganic phosphate transporter 1-6 20 529 - -
Stsc272100g00001 535 CDD MFS_PhT 25 508 - -
Stsc272100g00001 535 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Stsc272100g00001 535 Gene3D MFS general substrate transporter like domains 272 533 IPR036259 -
Stsc272100g00001 535 Coils Coil 252 279 - -
Stsc272100g00001 535 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272100g00001 Stsc-Chr272100 5030 7937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272100g00001 1 535 Inorganic Solute Cotransporters AT2G38940 77.944 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272100g00001 K08176 - gmx:100802890 897.116