Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272096g00004 ATGGACAAGAATCATTCTTCCTCTGCTTCTTCTGCTTCTTCATCTGCCTCGGTTACTAAACCATCACCACCACCACAACCCGTTGTTGCTGTTCCTTCACCACTTGTTGATGATGAACCCAACAACTTTAGTGATGAAGAAGGAGAATCACTGGTTGTTAAGACACCGGAGGAAGTCCTGGCAGATCTCACAACAAATGATGATAATAATATCATCGGAGGAAACTCTGCACCACCACCACCGCCGCAAATGATAGGTGGGGCTATCGCAACGGAAGCCGGTGGTGGTGGTGCAGTGGTTTTGGGTAATATAGGTGGTATGGGTGGTGCAATTGTTGGTGCAGTTAAAAGGCGGAAGCCTTCCGAAATTAGGGATCCTCCAAGTGGTACACCAACATGCCCAATTTGTAACAAAACATTTTCTAGTTGGAAGGGAGCCTTTGGACACATGAGAAAACACCCCGAACGTCAATACCGTGGCTTCTTCAAGCCCCCTACTTTCTCCTCTCCCTTTTCTCTCTCGACATCCGCCACCGCAGGTGGCATCAGTCAGGCTGCTGGTAGTGAAGGAGGAGGCAGTGCTGCTGCCTCTGGCGAGGTCGGAGAAGGTGGAGCTACAGCGCCGGTTCGCAACCGGATTGACCTCAACCACGAGCCAATGGACGGAGAGACAGTTGAAGAAAGACAACTACTTTTAGGGTTTGACCTCAACAAGCCTGCTGCTGATAAGATGTAG 735 0.4993 MDKNHSSSASSASSSASVTKPSPPPQPVVAVPSPLVDDEPNNFSDEEGESLVVKTPEEVLADLTTNDDNNIIGGNSAPPPPPQMIGGAIATEAGGGGAVVLGNIGGMGGAIVGAVKRRKPSEIRDPPSGTPTCPICNKTFSSWKGAFGHMRKHPERQYRGFFKPPTFSSPFSLSTSATAGGISQAAGSEGGGSAAASGEVGEGGATAPVRNRIDLNHEPMDGETVEERQLLLGFDLNKPAADKM 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272096g00004 244 MobiDBLite consensus disorder prediction 1 53 - -
Stsc272096g00004 244 MobiDBLite consensus disorder prediction 172 221 - -
Stsc272096g00004 244 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Stsc272096g00004 244 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 1 170 - -
Stsc272096g00004 244 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272096g00004 Stsc-Chr272096 12765 13740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272096g00004 127 184 C2H2 Transcription Factor Family AT4G35280 44.828 1.14e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc272096g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272096g00004 - - adu:107487295 182.956