Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272096g00003 ATGGAAAAGAAGAACCCTTCCTCCTCCTCTTCCTCCCCTCCTTCAACCCCCACCACCGAACCACCAGTACCACCGCCACAAGCCACTACTGAAATTCTGAAGTCAGTGGAAGAAGTGTTGGCAGAACTGACCGCCTATGAAGCAAGTGGTGGAAGCCCTCCTCCTCCTCCACCACCTCCTTTTGCGGGAGCAATGGCGGTTGGTGTCGGTGGGGAAGGGGTGGTGATGGGTGAAGTGGGTTTGGGTGGAAGTGGTGCAGTTGGTGGAGGGAGAAAGAGGAAGGCGTCAGAAGTGAAAGACCCTCCAACTGGAACACCAACATGCCCAGTTTGTAACAAAACTTTTCAAAGTTGGAAAGGTGCTTTTGGACACATGAGGAAGCACCCTGAACGCCAGTACCGTGGCTTCTTCAAGCCACCTACTTTCTCCCCCGGATCCGGCCCTGCTACTGGTGGTACAACCACCCACGGTTCCCGCGAAGGAGGAAGTAGCGGTGCCACCGCGGGTGGGCAGGTTGGAGAGGGTGGATCATCATCTGTTCGTGGCCAATTTGATCTGAACCAGCCAATGGAGAGAGGAGCGGGTGATGATGAACAAGGAAACGCTGCTGAGGAAGGAAAAGATTTAGGGTTTGATCTCAACAAGCCTGCTGATGAAGAAGACAGCGCATGA 672 0.5432 MEKKNPSSSSSSPPSTPTTEPPVPPPQATTEILKSVEEVLAELTAYEASGGSPPPPPPPPFAGAMAVGVGGEGVVMGEVGLGGSGAVGGGRKRKASEVKDPPTGTPTCPVCNKTFQSWKGAFGHMRKHPERQYRGFFKPPTFSPGSGPATGGTTTHGSREGGSSGATAGGQVGEGGSSSVRGQFDLNQPMERGAGDDEQGNAAEEGKDLGFDLNKPADEEDSA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272096g00003 223 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 85 142 - -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 134 223 - -
Stsc272096g00003 223 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 1 28 - -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 146 185 - -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 83 111 - -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 197 223 - -
Stsc272096g00003 223 MobiDBLite consensus disorder prediction 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272096g00003 Stsc-Chr272096 9063 10272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272096g00003 100 142 C2H2 Transcription Factor Family AT4G35280 51.163 5.69e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc272096g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272096g00003 - - adu:107487295 127.872