Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272095g00008 | ATGGAATTCTACAATAACCTAGAAGACTACTCGAAGAGTTCGTCGAGCGAAGAAACAGATCAGTCGTCGTACGAGCAAATCGATCAAGACATGGGAACCGGAAGATCCTACGAGTGTGTGTTTTGCAAAAGGGGATTCACCACAGCTCAAGCTTTGGGTGGACACATGAACATTCATAGAAAAGATAGAGCAAATAACAAAGGCAAAATTCCACCTTCTAGTTCAAGCAAGGTTGATGATGAGAACTACTATGCAGATCTAGGGCACTATTCAGCACCAATTAGTCCAAGCTATCTTGCAAGAAATGGAAATTATCATCATCATCATGAGGTAGATAATAATAATAATAACAACCCTTACCATCAATTTTATTTTCCTCCATCACACACTAATTCCCATGTCCAATATAATGAGATTTTGTTTGTAGAAAACCAAAGGGAAAGTGGGAAATTGTTTGGACAAGATTGGAGGCAAAGGGGTAATAATAATTTGAGCTTGTACACTAATAATAATCCAATATGTGTACATGAGAATAATAATAGTGGCAAAATAAAAGACAAGGGTGAAGATGGTGGCCTGGATTTGGAGCTTAGACTTGGTCATTATCCATAG | 612 | 0.3791 | MEFYNNLEDYSKSSSSEETDQSSYEQIDQDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNKGKIPPSSSSKVDDENYYADLGHYSAPISPSYLARNGNYHHHHEVDNNNNNNPYHQFYFPPSHTNSHVQYNEILFVENQRESGKLFGQDWRQRGNNNLSLYTNNNPICVHENNNSGKIKDKGEDGGLDLELRLGHYP | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272095g00008 | 203 | Pfam | C2H2-type zinc finger | 37 | 61 | - | - | |
Stsc272095g00008 | 203 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 37 | 64 | IPR013087 | - | |
Stsc272095g00008 | 203 | PANTHER | OS07G0101800 PROTEIN | 14 | 201 | - | - | |
Stsc272095g00008 | 203 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 39 | 59 | IPR013087 | - | |
Stsc272095g00008 | 203 | MobiDBLite | consensus disorder prediction | 59 | 79 | - | - | |
Stsc272095g00008 | 203 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Stsc272095g00008 | 203 | MobiDBLite | consensus disorder prediction | 7 | 29 | - | - | |
Stsc272095g00008 | 203 | SUPERFAMILY | beta-beta-alpha zinc fingers | 35 | 63 | IPR036236 | - | |
Stsc272095g00008 | 203 | Gene3D | Classic Zinc Finger | 10 | 87 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272095g00008 | Stsc-Chr272095 | 67673 | 68454 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272095g00008 | 37 | 111 | C2H2 Transcription Factor Family | AT5G43540 | 44.304 | 1.18e-14 | 66.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Stsc272095g00008 | zf-C2H2_6 | 1.8e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272095g00008 | - | - | ahf:112718298 | 296.589 |