Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272092g00006 ATGGCTATACCCACACCCACTCCCACACGTGTGTTTTCTTCTGGATTCACCACTACAACTCCAGACCCTCCCTTCACTTGCATTGCAATCAAATTCTCAAGCACAATCACTCATTTCCCTTTTGGGTTTTCACCCAATAAGCTTCACCTTCGCCCACTACTTAACACCACAAGAAATTTTTGTGCTATGGCAACTGGGGTGCAAGAAGTTCTTCCACCACCCGTTACTTCAACTTCATCCCCACCTTCCTTGTTTGATGGAACTACAAGGTTGTATATCTCCTATACCTGTCCGTATGCACAACGTGTATGGATCACCCGAAACTGTAAGGGATTGCAGGACAAGATACAATTGGTTCCTATTGATTTAAAAGATAGGCCTTCCTGGTATAAGGACAAAGTCTACCCACCCAACAAGGTTCCAGCTTTGGAACACGAAAATGAAGTCAGAGGAGAGAGTCTTGATCTGGTTAAATATATTGACAGTCACTTTGAAGGGCCCTCTCTTTCCCCTAGTAGTGGTCCTGCTATGGAGTTTGCTGAAGAGTTGCTATCTTACACTGACACATTTTACAAGACTGTTGTTTCTTCATTCAAAGGAGATAATTTGACAGAAGCTTGCACTGCATTTGATTACATTGAAACGGTTCTCTCCAAATATGATGATGGACCTTTCTTCCTTGGCCAATTCAGTCTTGTGGATATAGCATATGCTCCTTTCATTGAAAGGTTTCAGCTATTTCTCATGGATGTTAAGAATTATGATATTGGCTTTGGCAGGCCTAATCTCGCTGCATGGTTGGAGGCAATGAACAACATAGATGGCTACAAAGTAACCCGCTCTAATCCAAAGGAGCTTGTTGAAAGTTACAAGAAACGCTTCCTGGTACCATAA 894 0.4251 MAIPTPTPTRVFSSGFTTTTPDPPFTCIAIKFSSTITHFPFGFSPNKLHLRPLLNTTRNFCAMATGVQEVLPPPVTSTSSPPSLFDGTTRLYISYTCPYAQRVWITRNCKGLQDKIQLVPIDLKDRPSWYKDKVYPPNKVPALEHENEVRGESLDLVKYIDSHFEGPSLSPSSGPAMEFAEELLSYTDTFYKTVVSSFKGDNLTEACTAFDYIETVLSKYDDGPFFLGQFSLVDIAYAPFIERFQLFLMDVKNYDIGFGRPNLAAWLEAMNNIDGYKVTRSNPKELVESYKKRFLVP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272092g00006 297 Pfam Glutathione S-transferase, C-terminal domain 209 269 - -
Stsc272092g00006 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 66 294 IPR044629 GO:0004364
Stsc272092g00006 297 SUPERFAMILY Thioredoxin-like 81 169 IPR036249 -
Stsc272092g00006 297 Gene3D Glutaredoxin 62 165 - -
Stsc272092g00006 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Stsc272092g00006 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Stsc272092g00006 297 SUPERFAMILY GST C-terminal domain-like 164 294 IPR036282 -
Stsc272092g00006 297 FunFam Lambda class glutathione S-transferase 166 297 - -
Stsc272092g00006 297 Gene3D - 166 296 - -
Stsc272092g00006 297 CDD GST_C_Lambda 178 291 - -
Stsc272092g00006 297 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272092g00006 Stsc-Chr272092 35464 37601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272092g00006 50 293 Glutathione S-transferase Gene Family AT3G55040 60.000 8.39e-107 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272092g00006 K00799 - cave:132188422 369.007