Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272092g00005 ATGTCGGCTGATGTTATCAATAAAGCATTCTTGGCAACAGAAGAGGAATTTCTTTCTGTAGTAAGGAAGCAGTGGCAAATCAAGCCACAGCTAGCCTCTGTTGGATCCTGTTGTTTGACAGGCATAATATGTAGCGGGGTGCTCTATGTTGCGAATGCAGGAGACTCTAGAGCAGTGTTAGCCAGAACGGATGAGGCTACGAAAGAGATAAAAGCTATTCAGTTATCCTCTGAGCACAATGCTAGCTTCGAATCTGTCAGAGAGGAGTTGCGTTCTATGCATCCTGATGATCCACAGATTGTAGTTATGAAGCACCAAGTATGGCGCGTGAAGGGTCTGATACAGATTTCAAGATCCATTGGTGACGCCTATCTAAAGAAGGCAGAGTTTAACAAACCACCACTATTGCCGAAATTCAGGCTCTCTGAACCCTTTAAGAAGCCCATCCTTAAAGCCGAACCAGCAGTAACAGTTCAGAAACTCGAACCGGGAGATCAGTTTCTTATATTTGCATCGGATGGATTATGGGAGCACATGAACAATCAAGAAGCAGTTAACATTGTCCAGAGCTGTCCGCGCAATGGAGTAGCAAGGAGACTCATCAAAACTGCACTTTGTGAAGCTGCTAAAAAGAGAGAGATGAGATACTCAGACTTGCAGAAGATTGAGAAAGGGGTGAGGAGACATTTCCACGACGACATCACAGTCATAGTTTTGTTTCTCGATTCCCAATTAATCGCCCGCGATACTTGGAGCAGCCCTATGGTTTCAGTCAGAGGAGGTGGTTATAGTGGTAGTGGTCTTATTGGTCTTGGTCTTGTAGATGGCTAG 831 0.4489 MSADVINKAFLATEEEFLSVVRKQWQIKPQLASVGSCCLTGIICSGVLYVANAGDSRAVLARTDEATKEIKAIQLSSEHNASFESVREELRSMHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKAEFNKPPLLPKFRLSEPFKKPILKAEPAVTVQKLEPGDQFLIFASDGLWEHMNNQEAVNIVQSCPRNGVARRLIKTALCEAAKKREMRYSDLQKIEKGVRRHFHDDITVIVLFLDSQLIARDTWSSPMVSVRGGGYSGSGLIGLGLVDG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272092g00005 276 CDD PP2Cc 4 241 IPR001932 -
Stsc272092g00005 276 Gene3D - 2 250 IPR036457 -
Stsc272092g00005 276 SMART PP2C_4 1 239 IPR001932 -
Stsc272092g00005 276 SUPERFAMILY PP2C-like 3 242 IPR036457 -
Stsc272092g00005 276 Pfam Protein phosphatase 2C 4 211 IPR001932 -
Stsc272092g00005 276 ProSiteProfiles PPM-type phosphatase domain profile. 1 241 IPR001932 -
Stsc272092g00005 276 PANTHER PROTEIN PHOSPHATASE 10 239 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272092g00005 Stsc-Chr272092 33171 34841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272092g00005 1 262 PP2C-type Phosphatase Gene Family AT3G12620 76.336 3.15e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272092g00005 K01102 - tcc:18586300 427.557