Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc272090g00019 | GGTGGTGGTGGTTTATTAAATGGGAATGTCAGTTCAGTGCTAGCTGGGATGGGTTCAGCCGTGGTTGTGCTGCTAATATACCGTTGCATGTCCATGTTCTTGTGCATCCGCAATAATAATCAGATGAACCCAAGCATAGAGGAGGTGGCGGAATCTAGCAGTTTGAATAATTGGGTGTCGCATATGATCCCATCCCACAAGTACGAGAAGAAGAACGATGATGAGGATTGCACATGTGCAGTGTGCTTGGGAGAGTTGGAGGAGGGTGAGGAGGTGAGGAGTATGCCAGAGTGCATGCACTCTTTCCATGTCCCATGCATTGATATGTGGCTCCGTTCCCATTCAAGTTGCCCCCTTTGCCGTGCTGATGCCACACCTTCTTCCGCCAATAACAATCAACATCACACCACCATTCATATGGATTTCATGCAACATATTCTTCTCCAGCAACCTCCCCATGCACCCTCGCTTTGA | 474 | 0.4852 | GGGGLLNGNVSSVLAGMGSAVVVLLIYRCMSMFLCIRNNNQMNPSIEEVAESSSLNNWVSHMIPSHKYEKKNDDEDCTCAVCLGELEEGEEVRSMPECMHSFHVPCIDMWLRSHSSCPLCRADATPSSANNNQHHTTIHMDFMQHILLQQPPHAPSL | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc272090g00019 | 157 | Pfam | Ring finger domain | 78 | 121 | IPR001841 | - | |
Stsc272090g00019 | 157 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 15 | 125 | IPR044675 | - | |
Stsc272090g00019 | 157 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 121 | IPR001841 | - | |
Stsc272090g00019 | 157 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 37 | 127 | IPR013083 | - | |
Stsc272090g00019 | 157 | SUPERFAMILY | RING/U-box | 63 | 131 | - | - | |
Stsc272090g00019 | 157 | SMART | ring_2 | 79 | 120 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc272090g00019 | Stsc-Chr272090 | 64460 | 65006 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc272090g00019 | 63 | 129 | C3H Transcription Factor Family | AT3G03550 | 54.412 | 4.27e-19 | 80.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc272090g00019 | - | - | ahf:112782505 | 198.364 |