Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc272089g00017 ATGCATATAGTATCTCCTCAATTTCACACCCTTTACTTCCATTCTTCAAAACTTGAACACAAACACACAAACACACACTCTTCCTTGCTTCCTTCCTTCCTTCACCTGAGTTTGTTAGAAGCTTCCACAGAAGGAAGCAAAACCATGGCTTCAATTGGGGTGTCAGAGATGCTTGGTAACCCTATCAACTTGAGTCGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTCAAGACTGTGGCTCTCTTTGGTAAGAAGAAGGCAGCACCTCCTCCTCCTCCTAAGAAAGTTGCTGCTGCTGTCACTCCTGCCAATGATGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCCGAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGACCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAA 482 0.4834 MHIVSPQFHTLYFHSSKLEHKHTNTHSSLLPSFLHLSLLEASTEGSKTMASIGVSEMLGNPINLSRAARSAPSASSPATFKTVALFGKKKAAPPPPPKKVAAAVTPANDELAKWYGPDRRIFLPEGLLDRSEIPPYLTGEVPGDYGYDPFGLSKKPEDFA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc272089g00017 160 Gene3D Chlorophyll a/b binding protein domain 121 160 - -
Stsc272089g00017 160 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 68 160 IPR001344 GO:0009765|GO:0016020
Stsc272089g00017 160 SUPERFAMILY Chlorophyll a-b binding protein 113 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc272089g00017 Stsc-Chr272089 68524 69498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc272089g00017 49 160 Chloroplast and Mitochondria Gene Families AT4G10340 66.372 3.89e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc272089g00017 K08916 - aip:110264263 172.17